RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CTAGE9A4FU28 777 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 H0YC42 278 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 M0QX08 132 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 BUD23O43709 281 aaKnown RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 SYNGR3O43761 229 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 PEX11AO75192 247 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 PSMD10O75832 226 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 FYNP06241 537 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 SUPT20HL2P0C7V6 817 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 CTAGE8P0CG41 777 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 FERP16591 822 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 MATR3P43243 847 aaKnown RBP eCLIP5.48□□□□□ -1.53
PCF11-202ENST00000528336 MLLT10P55197 1068 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 TUBB4BP68371 445 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 SCN1BQ07699 218 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 CAMK2DQ13557 499 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 KRT33BQ14525 404 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 NHSL2Q5HYW2 709 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 PLXDC2Q6UX71 529 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 PIWIL4Q7Z3Z4 852 aaKnown RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 CNTN4Q8IWV2 1026 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 CTAGE4Q8IX94 777 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 ALG14Q96F25 216 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 CFAP36Q96G28 342 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 CFAP57Q96MR6 1250 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 MRPL1Q9BYD6 325 aaKnown RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 UPF2Q9HAU5 1272 aaKnown RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 TM9SF3Q9HD45 589 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 UTP6Q9NYH9 597 aaKnown RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 C6orf203Q9P0P8 240 aaPredicted RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 DNAJB4Q9UDY4 337 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 CFAP45Q9UL16 551 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 CAB39Q9Y376 341 aaPredicted RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 YIPF1Q9Y548 306 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 NALCNQ8IZF0 1738 aa5.48□□□□□ -1.53
PCF11-202ENST00000528336 ARHGEF28Q8N1W1 1705 aaKnown RBP5.48□□□□□ -1.53
PCF11-202ENST00000528336 NSD2O96028 1365 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 A0A1W2PRV1 198 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 OR2M5A3KFT3 312 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 C5orf60A6NFR6 353 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 P2RY10O00398 339 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 DDHD2O94830 711 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 TFAP2AP05549 437 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 UMODP07911 640 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 PDHBP11177 359 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 FDPSP14324 419 aaKnown RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 ZNF23P17027 643 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 CASTP20810 708 aaKnown RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 STIP1P31948 543 aaKnown RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 NRIP1P48552 1158 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 HOXA1P49639 335 aaPredicted RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 NPY4RP50391 375 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 IRX3P78415 501 aaPredicted RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 ARF5P84085 180 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 PTK6Q13882 451 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 INAQ16352 499 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 RABL6Q3YEC7 729 aaPredicted RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 CES4AQ5XG92 561 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 ALS2CLQ60I27 953 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 NFE4Q86UQ8 179 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 MCEMP1Q8IX19 187 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 TBC1D16Q8TBP0 767 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 CORO2AQ92828 525 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 SEMA4DQ92854 862 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 ACPTQ9BZG2 426 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 NYXQ9GZU5 481 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 MMP28Q9H239 520 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 TAS2R14Q9NYV8 317 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 PTTG2Q9NZH5 202 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 LEF1Q9UJU2 399 aaPredicted RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 OSGIN1Q9UJX0 560 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 PTRH2Q9Y3E5 179 aaKnown RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.47□□□□□ -1.53
PCF11-202ENST00000528336 ANKARQ7Z5J8 1434 aa5.47□□□□□ -1.53
PCF11-202ENST00000528336 C1orf167Q5SNV9 1468 aa5.46□□□□□ -1.53
PCF11-202ENST00000528336 KDRP35968 1356 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 IGLV5-45A0A087WSX0 123 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 A0A087WYN8 130 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 OR6C76A6NM76 312 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 SGK1O00141 431 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 LIPFP07098 398 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 TOP1P11387 765 aaKnown RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 CSF2RAP15509 400 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 PTPN3P26045 913 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 HSPA1LP34931 641 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 LIG4P49917 911 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 ATXN3P54252 364 aaPredicted RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 PHEXP78562 749 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 RALGDSQ12967 914 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 NPRL3Q12980 569 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 SNTB1Q13884 538 aaKnown RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 HYAL4Q2M3T9 481 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 HFEQ30201 348 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 RAB6CQ53S08 254 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 IGSF11Q5DX21 431 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 C9orf50Q5SZB4 431 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 C19orf48Q6RUI8 117 aa5.46□□□□□ -1.54
PCF11-202ENST00000528336 RBPMS2Q6ZRY4 209 aaKnown RBP5.46□□□□□ -1.54
PCF11-202ENST00000528336 USP43Q70EL4 1123 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms