RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 STK36Q9NRP7 1315 aa6.2□□□□□ -1.42
USP53-206ENST00000510737 A0A1B0GTQ1 180 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 USO1O60763 962 aaKnown RBP6.19□□□□□ -1.42
USP53-206ENST00000510737 NOL4O94818 638 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 CSH1P0DML2 217 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 CSH2P0DML3 217 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 KRTAP5-9P26371 169 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 TPMTP51580 245 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 ATP12AP54707 1039 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 ILKQ13418 452 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 MOXD1Q6UVY6 613 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 KRTAP7-1Q8IUC3 87 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 CACNA2D3Q8IZS8 1091 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 LSMEM2Q8N112 164 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 GHDCQ8N2G8 530 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 OR6Y1Q8NGX8 325 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 SPPL2BQ8TCT7 592 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 SAP25Q8TEE9 199 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 TMEM170AQ8WVE7 144 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 SENP8Q96LD8 212 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 MTMR9Q96QG7 549 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 EIF2AK1Q9BQI3 630 aaKnown RBP6.19□□□□□ -1.42
USP53-206ENST00000510737 EGLN1Q9GZT9 426 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 TM9SF3Q9HD45 589 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 VPS54Q9P1Q0 977 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 NDRG3Q9UGV2 375 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 LRCH1Q9Y2L9 728 aa6.19□□□□□ -1.42
USP53-206ENST00000510737 SETD2Q9BYW2 2564 aaPredicted RBP6.18□□□□□ -1.42
USP53-206ENST00000510737 A0A0G2JPF8 293 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 A0A1B0GVY2 172 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 A0A1W2PNU3 283 aaPredicted RBP6.18□□□□□ -1.42
USP53-206ENST00000510737 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.18□□□□□ -1.42
USP53-206ENST00000510737 HNRNPCL3B7ZW38 293 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 WNT9BO14905 357 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 HNRNPCL1O60812 293 aaKnown RBP6.18□□□□□ -1.42
USP53-206ENST00000510737 RGS11O94810 467 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 HNRNPCL4P0DMR1 293 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 TFPIP10646 304 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 SFTPCP11686 197 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 CKMT2P17540 419 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 OXTRP30559 389 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 NAMPTP43490 491 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 LINC01547P58512 204 aaPredicted RBP6.18□□□□□ -1.42
USP53-206ENST00000510737 TICAM1Q8IUC6 712 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 C2orf15Q8WU43 125 aaKnown RBP6.18□□□□□ -1.42
USP53-206ENST00000510737 GOLGA1Q92805 767 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 ERGIC1Q969X5 290 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 TCEANC2Q96MN5 208 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 NUP58Q9BVL2 599 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 ZNF696Q9H7X3 374 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 CYSLTR2Q9NS75 346 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 DEC1Q9P2X7 70 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 GRHPRQ9UBQ7 328 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 MYLKQ15746 1914 aa6.18□□□□□ -1.42
USP53-206ENST00000510737 POLQO75417 2590 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 K7ERI5 159 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 DFNA5O60443 496 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 ZIC3O60481 467 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 IGLV3-19P01714 112 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 MCF2P10911 925 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 SRD5A1P18405 259 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 CYP2F1P24903 491 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 CHMLP26374 656 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 EFNA5P52803 228 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 FUT11Q495W5 492 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 TMEM25Q86YD3 366 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 FBXO17Q96EF6 278 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 NPLQ9BXD5 320 aaPredicted RBP6.17□□□□□ -1.42
USP53-206ENST00000510737 SLC25A18Q9H1K4 315 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 TTC12Q9H892 705 aaPredicted RBP6.17□□□□□ -1.42
USP53-206ENST00000510737 POLR1BQ9H9Y6 1135 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 UXTQ9UBK9 157 aaPredicted RBP6.17□□□□□ -1.42
USP53-206ENST00000510737 PSAT1Q9Y617 370 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 TRIP11Q15643 1979 aa6.17□□□□□ -1.42
USP53-206ENST00000510737 CENPEQ02224 2701 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 ADGRG4Q8IZF6 3080 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 CACNA1DQ01668 2161 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 KLF18A0A0U1RQI7 1052 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 CCER2I3L3R5 266 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 EBAG9O00559 213 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 SLC9A3R1O14745 358 aaPredicted RBP6.16□□□□□ -1.42
USP53-206ENST00000510737 FGF17O60258 216 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 TSPAN3O60637 253 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 NDUFS7O75251 213 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 SETSIPP0DME0 302 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 ODC1P11926 461 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 CYP11B2P19099 503 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 ITGAXP20702 1163 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 CYP3A5P20815 502 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 ACP1P24666 158 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 ACSL1P33121 698 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 RYKP34925 604 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 KRTAP10-3P60369 221 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 RPL10AP62906 217 aaKnown RBP6.16□□□□□ -1.42
USP53-206ENST00000510737 SLC7A9P82251 487 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 SMARCB1Q12824 385 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 SRSF6Q13247 344 aaKnown RBP6.16□□□□□ -1.42
USP53-206ENST00000510737 CUL4BQ13620 913 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 SLC18A3Q16572 532 aa6.16□□□□□ -1.42
USP53-206ENST00000510737 ZSCAN23Q3MJ62 389 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms