RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ATP6V0E1O15342 81 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 FLRT2O43155 660 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 PAX1P15863 534 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 SULT2A1Q06520 285 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 TAF10Q12962 218 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 ZNF674Q2M3X9 581 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 SMU1Q2TAY7 513 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 LBHQ53QV2 105 aaPredicted RBP4.16□□□□□ -1.74
SMC4-218ENST00000486711 WDR38Q5JTN6 314 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 SLC35D3Q5M8T2 416 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 CCDC158Q5M9N0 1113 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 C20orf194Q5TEA3 1177 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 SLC26A9Q7LBE3 791 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 C10orf53Q8N6V4 93 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 STPG4Q8N801 248 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 MAPKAPK5-AS1Q8N8E1 139 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.16□□□□□ -1.74
SMC4-218ENST00000486711 ZNF383Q8NA42 475 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 CCDC63Q8NA47 563 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 OR13C3Q8NGS6 347 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 FIBINQ8TAL6 211 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 UBLCP1Q8WVY7 318 aaPredicted RBP4.16□□□□□ -1.74
SMC4-218ENST00000486711 TEKT1Q969V4 418 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 TSACCQ96A04 125 aaPredicted RBP4.16□□□□□ -1.74
SMC4-218ENST00000486711 PYCR2Q96C36 320 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 MMP28Q9H239 520 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 MTRRQ9UBK8 725 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 RIPK3Q9Y572 518 aa4.16□□□□□ -1.74
SMC4-218ENST00000486711 IGLV9-49A0A0B4J1Y8 123 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 A0A0G2JLW4 131 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 O00370 1275 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 P2RY10O00398 339 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CIDEAO60543 219 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 SELENOFO60613 162 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 SERPINB2P05120 415 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 LBPP18428 481 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 PSMB4P28070 264 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 TIA1P31483 386 aaKnown RBP eCLIP4.15□□□□□ -1.75
SMC4-218ENST00000486711 CETN2P41208 172 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CDX1P47902 265 aaPredicted RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 GMPSP49915 693 aaPredicted RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 CLDN15P56746 228 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 PHEXP78562 749 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CACNG1Q06432 222 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 TRAP1Q12931 704 aaKnown RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 GPR17Q13304 367 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 MORF4L2Q15014 288 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 GLRA4Q5JXX5 417 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CYB5D1Q6P9G0 228 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CTR9Q6PD62 1173 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 C19orf48Q6RUI8 117 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 C15orf39Q6ZRI6 1047 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 TRMT1LQ7Z2T5 733 aaKnown RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 CLYBLQ8N0X4 340 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 UXS1Q8NBZ7 420 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 OR10Q1Q8NGQ4 319 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CENPTQ96BT3 561 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CCDC43Q96MW1 224 aaKnown RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 CDK19Q9BWU1 502 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 FAM49AQ9H0Q0 323 aaPredicted RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 CPVLQ9H3G5 476 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 ACTL8Q9H568 366 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 TLE6Q9H808 572 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 TMEM206Q9H813 350 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 ZNF334Q9HCZ1 680 aaPredicted RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 PPANQ9NQ55 473 aaKnown RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 ADPRHL2Q9NX46 363 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 TMEM161AQ9NX61 479 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 P4HTMQ9NXG6 502 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 C19orf25Q9UFG5 118 aaPredicted RBP4.15□□□□□ -1.75
SMC4-218ENST00000486711 GMEB2Q9UKD1 530 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 TNNQ9UQP3 1299 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 CHKBQ9Y259 395 aa4.15□□□□□ -1.75
SMC4-218ENST00000486711 LRRD1A4D1F6 860 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 KBTBD13C9JR72 458 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 ST8SIA3O43173 380 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 PRAF2O60831 178 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 CRCPO75575 148 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 TSHBP01222 138 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 APOHP02749 345 aaPredicted RBP4.14□□□□□ -1.75
SMC4-218ENST00000486711 EDN1P05305 212 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 IGHV4-31P0DP07 118 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 ATP6V1B1P15313 513 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 ITIH1P19827 911 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 CEACAM8P31997 349 aaPredicted RBP4.14□□□□□ -1.75
SMC4-218ENST00000486711 DCTP40126 519 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 KCNJ1P48048 391 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 NPBWR1P48145 328 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 SNU13P55769 128 aaKnown RBP4.14□□□□□ -1.75
SMC4-218ENST00000486711 B3GALT5-AS1P59052 145 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 STX1BP61266 288 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 ST8SIA6P61647 398 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 KCNJ10P78508 379 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 RASGEF1BQ0VAM2 473 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 RCN2Q14257 317 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 ZC2HC1CQ53FD0 456 aaPredicted RBP4.14□□□□□ -1.75
SMC4-218ENST00000486711 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.14□□□□□ -1.75
SMC4-218ENST00000486711 LYSMD4Q5XG99 296 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms