RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 C2orf74A8MZ97 194 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 PATE3B3GLJ2 98 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 PIP5K1BO14986 540 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 DIAPH2O60879 1101 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 DCTN3O75935 186 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 RETP07949 1114 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 C1GALT1C1LP0DN25 315 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 CDH1P12830 882 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 GSTM2P28161 218 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 PEBP1P30086 187 aaKnown RBP12.13□□□□□ -0.47
SIK3-209ENST00000480222 SERPINB1P30740 379 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 CAPZBP47756 277 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 IDH3AP50213 366 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 CCR8P51685 355 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 REEP5Q00765 189 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 BTKQ06187 659 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 PRDX1Q06830 199 aaKnown RBP12.13□□□□□ -0.47
SIK3-209ENST00000480222 BNIP3Q12983 259 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 IFT88Q13099 833 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 DOC2AQ14183 400 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 NR1D2Q14995 579 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 HIST2H2ACQ16777 129 aaPredicted RBP12.13□□□□□ -0.47
SIK3-209ENST00000480222 SLC5A12Q1EHB4 618 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 XKR7Q5GH72 579 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 FRG2Q64ET8 278 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 HIST2H2AA3Q6FI13 130 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 MED27Q6P2C8 311 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 DDIASQ8IXT1 998 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 KRT78Q8N1N4 520 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 OR2L3Q8NG85 312 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 OR2A1Q8NGT9 310 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 ACTRT2Q8TDY3 377 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 CCT6BQ92526 530 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 FRG2BQ96QU4 278 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 SLC38A3Q99624 504 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 AIF1LQ9BQI0 150 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 CCDC28BQ9BUN5 200 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 MRPS30Q9NP92 439 aaKnown RBP12.13□□□□□ -0.47
SIK3-209ENST00000480222 TCF7L2Q9NQB0 619 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 ABCF3Q9NUQ8 709 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 MRGBPQ9NV56 204 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 RIC8BQ9NVN3 520 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 ANKMY1Q9P2S6 941 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 GMEB2Q9UKD1 530 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 PCDHGA11Q9Y5H2 935 aa12.13□□□□□ -0.47
SIK3-209ENST00000480222 SERTM1A2A2V5 107 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 OR6C74A6NCV1 312 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 RHPN2P1A8MT19 583 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ISM1B1AKI9 464 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 MANBAO00462 879 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 BTN3A3O00478 584 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 SDHDO14521 159 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ZW10O43264 779 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 GFRA3O60609 400 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 PRAMEF4O60810 478 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ULK1O75385 1050 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 JUNP05412 331 aaKnown RBP12.12□□□□□ -0.47
SIK3-209ENST00000480222 HSD3B1P14060 373 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 PNLIPP16233 465 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 GLB1P16278 677 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ENGP17813 658 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 CD22P20273 847 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 HSD3B2P26439 372 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 PSMB5P28074 263 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 GPR3P46089 330 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ATXN3P54252 364 aaPredicted RBP12.12□□□□□ -0.47
SIK3-209ENST00000480222 IRX1P78414 480 aaPredicted RBP12.12□□□□□ -0.47
SIK3-209ENST00000480222 PHEXP78562 749 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 CSTF3Q12996 717 aaKnown RBP12.12□□□□□ -0.47
SIK3-209ENST00000480222 SLBPQ14493 270 aaKnown RBP eCLIP12.12□□□□□ -0.47
SIK3-209ENST00000480222 ZRSR2Q15696 482 aaKnown RBP12.12□□□□□ -0.47
SIK3-209ENST00000480222 CPSF6Q16630 551 aaKnown RBP eCLIP12.12□□□□□ -0.47
SIK3-209ENST00000480222 PRAMEF9Q5VWM5 478 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 METTL21CQ5VZV1 264 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 FAM129CQ86XR2 697 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 SLC35F3Q8IY50 421 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 LAS2Q8IYD9 372 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 C2orf73Q8N5S3 287 aaPredicted RBP12.12□□□□□ -0.47
SIK3-209ENST00000480222 TBC1D19Q8N5T2 526 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 FAM181AQ8N9Y4 354 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 OR10G6Q8NH81 332 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 JPH3Q8WXH2 748 aaPredicted RBP12.12□□□□□ -0.47
SIK3-209ENST00000480222 RILPQ96NA2 401 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 EBF4Q9BQW3 602 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ACAT2Q9BWD1 397 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 NT5DC2Q9H857 520 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 FSCN3Q9NQT6 498 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 SPHK1Q9NYA1 384 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ACTR10Q9NZ32 417 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 TRIM33Q9UPN9 1127 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 SH2B3Q9UQQ2 575 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 TIMM22Q9Y584 194 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 PCDHGB2Q9Y5G2 931 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 KLK4Q9Y5K2 254 aa12.12□□□□□ -0.47
SIK3-209ENST00000480222 ADAMTS9Q9P2N4 1935 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 GSAPA4D1B5 854 aa12.11□□□□□ -0.47
SIK3-209ENST00000480222 NPIPB8E9PQR5 432 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms