RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 ACSS2Q9NR19 701 aa13.18□□□□□ -0.3
LINC00173-201ENST00000470091 OXSMQ9NWU1 459 aa13.18□□□□□ -0.3
LINC00173-201ENST00000470091 KLHL42Q9P2K6 505 aa13.18□□□□□ -0.3
LINC00173-201ENST00000470091 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
LINC00173-201ENST00000470091 RNF112Q9ULX5 631 aa13.18□□□□□ -0.3
LINC00173-201ENST00000470091 UTP20O75691 2785 aaKnown RBP13.18□□□□□ -0.3
LINC00173-201ENST00000470091 OR52A4PA6NMU1 304 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 SUPT3HB4E1H0 165 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 UBXN8O00124 270 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 QSOX1O00391 747 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 NDUFAB1O14561 156 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 KIF1CO43896 1103 aaKnown RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 SMIM24O75264 130 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 SUPT3HO75486 399 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 LYPLA1O75608 230 aaPredicted RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 ZNF28P17035 718 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 XRCC1P18887 633 aaPredicted RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 TCN2P20062 427 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 F8A1P23610 371 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 ATP5F1P24539 256 aaPredicted RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 CLCNKAP51800 687 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 CDC20Q12834 499 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 GBX1Q14549 363 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 BCL7AQ4VC05 210 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 LRRTM4Q86VH4 590 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 TRAPPC5Q8IUR0 188 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 MYO1HQ8N1T3 1032 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 GALNT6Q8NCL4 622 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 C9orf43Q8TAL5 461 aaPredicted RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 SREK1Q8WXA9 508 aaKnown RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 STARD8Q92502 1023 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 PDLIM5Q96HC4 596 aaKnown RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 OR6C1Q96RD1 312 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 EFHD1Q9BUP0 239 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 GATA5Q9BWX5 397 aaPredicted RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 ULBP3Q9BZM4 244 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 TRIT1Q9H3H1 467 aaKnown RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 EPB41L1Q9H4G0 881 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 LATS2Q9NRM7 1088 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 TMEM184BQ9Y519 407 aaPredicted RBP13.17□□□□□ -0.3
LINC00173-201ENST00000470091 RELNP78509 3460 aa13.17□□□□□ -0.3
LINC00173-201ENST00000470091 DOPEY2Q9Y3R5 2298 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 LILRA5A6NI73 299 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 CHUKO15111 745 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 ITM2AO43736 263 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 TRIM13O60858 407 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 SNNO75324 88 aaPredicted RBP13.16□□□□□ -0.3
LINC00173-201ENST00000470091 H2AFYO75367 372 aaKnown RBP13.16□□□□□ -0.3
LINC00173-201ENST00000470091 KATNA1O75449 491 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 DLGAP3O95886 979 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 CBSLP0DN79 551 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 IDSP22304 550 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 ARRB2P32121 409 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 CBSP35520 551 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 DLSTP36957 453 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 STAT5AP42229 794 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 OCRLQ01968 901 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 HSPA14Q0VDF9 509 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 SYTL3Q4VX76 610 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 IRGCQ6NXR0 463 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 C6orf15Q6UXA7 325 aaPredicted RBP13.16□□□□□ -0.3
LINC00173-201ENST00000470091 FAM92BQ6ZTR7 304 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 RASGRP3Q8IV61 690 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 VRK3Q8IV63 474 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 ZNF547Q8IVP9 402 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 AVL9Q8NBF6 648 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 OR6Y1Q8NGX8 325 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 RHEBL1Q8TAI7 183 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 STAG3L4Q8TBR4 150 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 APOBEC4Q8WW27 367 aaKnown RBP13.16□□□□□ -0.3
LINC00173-201ENST00000470091 CXorf40BQ96DE9 158 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 MOCOSQ96EN8 888 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 TMEM237Q96Q45 408 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 ELAC2Q9BQ52 826 aaKnown RBP13.16□□□□□ -0.3
LINC00173-201ENST00000470091 CCM2Q9BSQ5 444 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 PITPNM3Q9BZ71 974 aa13.16□□□□□ -0.3
LINC00173-201ENST00000470091 SIDT1Q9NXL6 827 aaKnown RBP13.16□□□□□ -0.3
LINC00173-201ENST00000470091 RP1L1Q8IWN7 2480 aaPredicted RBP13.16□□□□□ -0.3
LINC00173-201ENST00000470091 GPR89AB7ZAQ6 455 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 VEGFDO43915 354 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 KIAA0754O94854 1291 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 C9P02748 559 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 GPR89BP0CG08 455 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 ENO3P13929 434 aaPredicted RBP13.15□□□□□ -0.3
LINC00173-201ENST00000470091 MTHFD2P13995 350 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 GRK2P25098 689 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 PREPP48147 710 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 SLC1A6P48664 564 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 PRKAA2P54646 552 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 DNAJB13P59910 316 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 ABCE1P61221 599 aaKnown RBP13.15□□□□□ -0.3
LINC00173-201ENST00000470091 MC1RQ01726 317 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 ERV3-1Q14264 604 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 PLEKHS1Q5SXH7 462 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 FRA10AC1Q70Z53 315 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 ADAMTSL2Q86TH1 951 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 GPSM1Q86YR5 675 aa13.15□□□□□ -0.3
LINC00173-201ENST00000470091 ESX1Q8N693 406 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms