RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 DYNC2LI1Q8TCX1 351 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 PLD4Q96BZ4 506 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 COPS4Q9BT78 406 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 C1QTNF3Q9BXJ4 246 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 MRPL9Q9BYD2 267 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 CLPBQ9H078 707 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 C1orf109Q9NX04 203 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 SIRT5Q9NXA8 310 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 AGO1Q9UL18 857 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 SNX6Q9UNH7 406 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 NEUROG3Q9Y4Z2 214 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 PCDHGA3Q9Y5H0 932 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ILVBLA1L0T0 632 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 TRIM64BA6NI03 449 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 AP3D1O14617 1153 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 PCDHGA12O60330 932 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ITPKAP23677 461 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 S100A5P33763 92 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ATP5C1P36542 298 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 CCL23P55773 120 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 RPP38P78345 283 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 KCNC4Q03721 635 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 AGAP7PQ5VUJ5 663 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 CCBE1Q6UXH8 406 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 TMC5Q6UXY8 1006 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 TSPEARQ8WU66 669 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ZFYVE19Q96K21 471 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 PANX1Q96RD7 426 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 GPR83Q9NYM4 423 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ANKMY1Q9P2S6 941 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 NUMA1Q14980 2115 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 STX16O14662 325 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 INSIG1O15503 277 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 NUDT7P0C024 238 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 TTPAP49638 278 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 SLC35A2P78381 396 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ARF5P84085 180 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 OR2T5Q6IEZ7 315 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 TMEM150AQ86TG1 271 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 LYSMD2Q8IV50 215 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ADGRG2Q8IZP9 1017 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 SVOPLQ8N434 492 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 OR2T29Q8NH02 315 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 DNASE1L2Q92874 299 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ATG10Q9H0Y0 220 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 TRIT1Q9H3H1 467 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ASB8Q9H765 288 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 QPCTLQ9NXS2 382 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 OGDHLQ9ULD0 1010 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 DNMT3AQ9Y6K1 912 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-208ENST00000463007 PRSS21Q9Y6M0 314 aa12.08□□□□□ -0.48
HDAC4-208ENST00000463007 ANKRD66B4E2M5 251 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 TAF4O00268 1085 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 RFPL2O75678 378 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 KRT8P05787 483 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 RACK1P63244 317 aaKnown RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 HSPA14Q0VDF9 509 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 TAF1AQ15573 450 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 ZNF404Q494X3 552 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 TPRG1LQ5T0D9 272 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 FAM180BQ6P0A1 224 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 NLGN4XQ8N0W4 816 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 RHOXF1Q8NHV9 184 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 TRMT2BQ96GJ1 504 aaKnown RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 PPP3R2Q96LZ3 170 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 ZNF641Q96N77 438 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 ZNF300Q96RE9 604 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 KLF16Q9BXK1 252 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 AASDHPPTQ9NRN7 309 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 HEBP1Q9NRV9 189 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 VCANP13611 3396 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 K7ERQ8 282 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 HOXA2O43364 376 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 CLDN11O75508 207 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 GNRH1P01148 92 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 STSP08842 583 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 ALOX5P09917 674 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 GRK5P34947 590 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 MRPL19P49406 292 aaKnown RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 TOP3AQ13472 1001 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 MED22Q15528 200 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 DEPDC1Q5TB30 811 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 SBSNQ6UWP8 590 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 ZNF551Q7Z340 670 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 HIPK1Q86Z02 1210 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 CLECL1Q8IZS7 167 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 OR8J3Q8NGG0 315 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 CNDP2Q96KP4 475 aaKnown RBP12.07□□□□□ -0.48
HDAC4-208ENST00000463007 APOL4Q9BPW4 351 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 RNF38Q9H0F5 515 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 GORASP2Q9H8Y8 452 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 CREBZFQ9NS37 354 aa12.07□□□□□ -0.48
HDAC4-208ENST00000463007 RAD18Q9NS91 495 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms