RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PAQR7Q86WK9 346 aa17.07■□□□□ 0.32
MSH6-207ENST00000456246 MYO1HQ8N1T3 1032 aa17.07■□□□□ 0.32
MSH6-207ENST00000456246 RERGQ96A58 199 aaPredicted RBP17.07■□□□□ 0.32
MSH6-207ENST00000456246 SNF8Q96H20 258 aa17.07■□□□□ 0.32
MSH6-207ENST00000456246 SMAD5Q99717 465 aaKnown RBP17.07■□□□□ 0.32
MSH6-207ENST00000456246 PPANQ9NQ55 473 aaKnown RBP17.07■□□□□ 0.32
MSH6-207ENST00000456246 CDC14AQ9UNH5 594 aa17.07■□□□□ 0.32
MSH6-207ENST00000456246 HEATR5BQ9P2D3 2071 aa17.07■□□□□ 0.32
MSH6-207ENST00000456246 AGPSO00116 658 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 IPO13O94829 963 aaKnown RBP17.06■□□□□ 0.32
MSH6-207ENST00000456246 SEC31AO94979 1220 aaKnown RBP17.06■□□□□ 0.32
MSH6-207ENST00000456246 EIF2S1P05198 315 aaKnown RBP17.06■□□□□ 0.32
MSH6-207ENST00000456246 F7P08709 466 aaPredicted RBP17.06■□□□□ 0.32
MSH6-207ENST00000456246 CCND1P24385 295 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 IMPA1P29218 277 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 SOX8P57073 446 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 MYBPC3Q14896 1274 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 NKG7Q16617 165 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 PRTGQ2VWP7 1150 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 STEAP4Q687X5 459 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 FBXO42Q6P3S6 717 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 COX15Q7KZN9 410 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 PPP1R32Q7Z5V6 425 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 ATCAYQ86WG3 371 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 CCDC138Q96M89 665 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 NDNQ99608 321 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 SPSB2Q99619 263 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 ZNF304Q9HCX3 659 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 CCDC177Q9NQR7 707 aaPredicted RBP17.06■□□□□ 0.32
MSH6-207ENST00000456246 SEMA3GQ9NS98 782 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 CCDC88CQ9P219 2028 aa17.06■□□□□ 0.32
MSH6-207ENST00000456246 RP1L1Q8IWN7 2480 aaPredicted RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 LOC105369274A0A096LPK9 316 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 IGKV1-8A0A0C4DH67 115 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 LOC102723532A0A0G2JNH3 316 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 PABPN1LA6NDY0 278 aaKnown RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 H0YGG7 62 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 TTI1O43156 1089 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 BANF1O75531 89 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 AHSGP02765 367 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 VARSP26640 1264 aaKnown RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 ELK3P41970 407 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 CARSP49589 748 aaKnown RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 ITGA8P53708 1063 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 ARF3P61204 181 aaPredicted RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 OCA2Q04671 838 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 ILF2Q12905 390 aaKnown RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 AIMP2Q13155 320 aaKnown RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 PDAP1Q13442 181 aaKnown RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 TEDDM1Q5T9Z0 273 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 FAM45BPQ6NSW5 357 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 ADCK2Q7Z695 626 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 LRRC56Q8IYG6 542 aaPredicted RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 OR4N4Q8N0Y3 316 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 GALNT16Q8N428 558 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 CSNK1A1LQ8N752 337 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 BBOF1Q8ND07 529 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 PPFIBP2Q8ND30 876 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 FAM45AQ8TCE6 357 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 TM9SF4Q92544 642 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 COL26A1Q96A83 441 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 CFAP36Q96G28 342 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 CABS1Q96KC9 395 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 OR2A5Q96R48 311 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 NUDT9Q9BW91 350 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 PARVBQ9HBI1 364 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 ATP13A2Q9NQ11 1180 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 ZNF282Q9UDV7 671 aaPredicted RBP17.05■□□□□ 0.32
MSH6-207ENST00000456246 CDC23Q9UJX2 597 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 PYCARDQ9ULZ3 195 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 CHMP2BQ9UQN3 213 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 TEX264Q9Y6I9 313 aa17.05■□□□□ 0.32
MSH6-207ENST00000456246 TNRC6AQ8NDV7 1962 aaKnown RBP17.04■□□□□ 0.32
MSH6-207ENST00000456246 NUP210LQ5VU65 1888 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 A6NL46 340 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 VSTM2BA6NLU5 285 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 EFCAB8A8MWE9 144 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 NRP2O60462 931 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 HIST1H2AGP0C0S8 130 aaPredicted RBP17.04■□□□□ 0.32
MSH6-207ENST00000456246 HIST1H2ADP20671 130 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 GABRB3P28472 473 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 OR1D4P47884 311 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 CD97P48960 835 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 IL2P60568 153 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 YBX1P67809 324 aaKnown RBP17.04■□□□□ 0.32
MSH6-207ENST00000456246 PRAMEF13Q5VWM6 474 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 PAQR3Q6TCH7 311 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 IGDCC3Q8IVU1 814 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 EFCAB3Q8N7B9 438 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 EEF1AKMT1Q8WVE0 214 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 MIB2Q96AX9 1013 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 LINGO1Q96FE5 620 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 HIST1H2AHQ96KK5 128 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 C10orf90Q96M02 699 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 HIST1H2AJQ99878 128 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 TRIM51Q9BSJ1 452 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 H2AFJQ9BTM1 129 aa17.04■□□□□ 0.32
MSH6-207ENST00000456246 STOX2Q9P2F5 926 aaPredicted RBP17.04■□□□□ 0.32
MSH6-207ENST00000456246 CTSFQ9UBX1 484 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms