RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 ODC1P11926 461 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CD247P20963 164 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CTNNB1P35222 781 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 RAB13P51153 203 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 AIF1P55008 147 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 IL2P60568 153 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 NKX6-1P78426 367 aaPredicted RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SLC6A3Q01959 620 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CDK5R2Q13319 367 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SEMA5AQ13591 1074 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 KEAP1Q14145 624 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ANXA8L1Q5VT79 327 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SLC22A10Q63ZE4 541 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 TRIM40Q6P9F5 258 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CDHR3Q6ZTQ4 885 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 LILRA2Q8N149 483 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 FAM83FQ8NEG4 500 aaPredicted RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SGCDQ92629 289 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SAGE1Q9NXZ1 904 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 HOXC10Q9NYD6 342 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ZMYM5Q9UJ78 669 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 PCDHB5Q9Y5E4 795 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 PITPNM1O00562 1244 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 TP73O15350 636 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MICAL2O94851 1124 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MOCS2O96007 188 aaPredicted RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ADRB2P07550 413 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 RPL3P39023 403 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ARCN1P48444 511 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 GPR15P49685 360 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 GZMKP49863 264 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 NUDT6P53370 316 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 AIMP2Q13155 320 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SLC25A24Q6NUK1 477 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 RETSATQ6NUM9 610 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 FAM180AQ6UWF9 173 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 BEND5Q7L4P6 421 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SPRED1Q7Z699 444 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ZSWIM9Q86XI8 627 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 NIPA2Q8N8Q9 360 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 DTX3Q8N9I9 347 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 OR10Z1Q8NGY1 313 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 OR14K1Q8NGZ2 314 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 KCNJ9Q92806 393 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 USB1Q9BQ65 265 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SPATA5L1Q9BVQ7 753 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 NKX6-2Q9C056 277 aaPredicted RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MAGIXQ9H6Y5 334 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MOCS1Q9NZB8 636 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ERVW-1Q9UQF0 538 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MEMO1Q9Y316 297 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 NAALAD2Q9Y3Q0 740 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 METTL15A6NJ78 407 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ZNF98A6NK75 572 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 FAM155AB1AL88 458 aaPredicted RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 C9JVG2 144 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 PMM2O15305 246 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 FARS2O95363 451 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SLC6A2P23975 617 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 TNFSF8P32971 234 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 RNF4P78317 190 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 KLF1Q13351 362 aaPredicted RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 EIF4HQ15056 248 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SIX1Q15475 284 aaPredicted RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 AP5B1Q2VPB7 878 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 PROX2Q3B8N5 592 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CDNFQ49AH0 187 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 VARS2Q5ST30 1063 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 DCUN1D3Q8IWE4 304 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 TCTE3Q8IZS6 198 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 KLHL36Q8N4N3 616 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ZNF454Q8N9F8 522 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 TMEM185AQ8NFB2 350 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 HAS1Q92839 578 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CLP1Q92989 425 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 KCNC2Q96PR1 638 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CACNG6Q9BXT2 260 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SLC38A1Q9H2H9 487 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 AKTIPQ9H8T0 292 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ACSS2Q9NR19 701 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 KANSL3Q9P2N6 904 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 ALS2Q96Q42 1657 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 DOT1LQ8TEK3 1739 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 TCRBV7S3A2A0A539 114 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 H7C1Q1 480 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 SDHDO14521 159 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 HSPA12AO43301 675 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 LRCH4O75427 683 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 PRH1P02810 166 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 UBBP0CG47 229 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 UBCP0CG48 685 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 COL6A1P12109 1028 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MMP12P39900 470 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 NR0B1P51843 470 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 TKTL1P51854 596 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 CDH12P55289 794 aa5.02□□□□□ -1.61
SCN11A-202ENST00000444237 RPS27AP62979 156 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 UBA52P62987 128 aaKnown RBP5.02□□□□□ -1.61
SCN11A-202ENST00000444237 MRPS5P82675 430 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms