RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 IQCF1Q8N6M8 205 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 SLC43A3Q8NBI5 491 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ANGPTL6Q8NI99 470 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 SH3RF3Q8TEJ3 882 aaPredicted RBP3.2□□□□□ -1.9
PHF3-202ENST00000393387 ITPKCQ96DU7 683 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 LRRC46Q96FV0 321 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 SLC41A2Q96JW4 573 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 C7orf26Q96N11 449 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 TSSK3Q96PN8 268 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 PCDHB18PQ96TA0 734 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 HBEGFQ99075 208 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CDT1Q9H211 546 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 FKRPQ9H9S5 495 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 ACKR4Q9NPB9 350 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 NECTIN3Q9NQS3 549 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 CLCF1Q9UBD9 225 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 MRC2Q9UBG0 1479 aa3.2□□□□□ -1.9
PHF3-202ENST00000393387 A0A088AWK7 358 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 A0A1W2PQJ5 194 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 MTMR11A4FU01 709 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 TNFRSF10AO00220 468 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 CLDN4O14493 209 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PRRG1O14668 218 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 CRTAPO75718 401 aaPredicted RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 CKBP12277 381 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 MAPK3P27361 379 aaPredicted RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 HOXD10P28358 340 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 RBMXP38159 391 aaKnown RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 CDC42EP1Q00587 391 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 CHIT1Q13231 466 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 GNMTQ14749 295 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PDIA6Q15084 440 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 CEBPEQ15744 281 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 NTRK2Q16620 822 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 FSCN1Q16658 493 aaKnown RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 ACSBG2Q5FVE4 666 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 SLFN11Q7Z7L1 901 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 SLC51AQ86UW1 340 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 SERPINA9Q86WD7 417 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ZNF440Q8IYI8 595 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 SLC43A2Q8N370 569 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 Q8N402 240 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 REPS2Q8NFH8 660 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 SEMA6DQ8NFY4 1073 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 OR10A6Q8NH74 314 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ACTL9Q8TC94 416 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 EPS8L1Q8TE68 723 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 NANOS1Q8WY41 292 aaKnown RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 TM9SF4Q92544 642 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PPP3R2Q96LZ3 170 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 SPATA33Q96N06 139 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 COPS8Q99627 209 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 YIPF4Q9BSR8 244 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ZNF518BQ9C0D4 1074 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 BCAS3Q9H6U6 928 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 CRLF2Q9HC73 371 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 IFT52Q9Y366 437 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 BOLA1Q9Y3E2 137 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 HCN4Q9Y3Q4 1203 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ANKARQ7Z5J8 1434 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 LRRC9Q6ZRR7 1453 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 EFCAB7A8K855 629 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 LRRN3E7EW58 273 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 TLR4O00206 839 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 NME6O75414 186 aaPredicted RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 STK17BO94768 372 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PAHP00439 452 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 TFP02787 698 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 OPN1SWP03999 348 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ALPIP09923 528 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PIRTP0C851 137 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 DPEP1P16444 411 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PSMB4P28070 264 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ADH6P28332 368 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 MAPK8P45983 427 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 MAP2K3P46734 347 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 AVPR1BP47901 424 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PPT1P50897 306 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 TPMTP51580 245 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 HNRNPFP52597 415 aaKnown RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 RPL24P83731 157 aaKnown RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 HSPB3Q12988 150 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 SNTB2Q13425 540 aaKnown RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 TUSC3Q13454 348 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PARP6Q2NL67 630 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ZNF829Q3KNS6 432 aaPredicted RBP3.19□□□□□ -1.9
PHF3-202ENST00000393387 SV2CQ496J9 727 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 RTL4Q6ZR62 310 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 MYPNQ86TC9 1320 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 FJX1Q86VR8 437 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 KDM8Q8N371 416 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ZNF676Q8N7Q3 588 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ZFP41Q8N8Y5 198 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.19□□□□□ -1.99e-7■■■■■ 28.1
PHF3-202ENST00000393387 ZCCHC10Q8TBK6 192 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 CDKN2AIPNLQ96HQ2 116 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 MMP19Q99542 508 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ZNF341Q9BYN7 854 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 LRRN3Q9H3W5 708 aa3.19□□□□□ -1.9
PHF3-202ENST00000393387 ACSS3Q9H6R3 686 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms