RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 FSD2A1L4K1 749 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 A8MV72 311 aaPredicted RBP2.61□□□□□ -1.99
TRAV40-201ENST00000390467 NPIPB9F8W1W9 429 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 PHOX2AO14813 284 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 TFECO14948 347 aaPredicted RBP2.61□□□□□ -1.99
TRAV40-201ENST00000390467 ATP1B1P05026 303 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 MELTFP08582 738 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 OXTRP30559 389 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 NTRK2Q16620 822 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 C15orf59Q2T9L4 293 aaPredicted RBP2.61□□□□□ -1.99
TRAV40-201ENST00000390467 MCMDC2Q4G0Z9 681 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 GARNL3Q5VVW2 1013 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 PRR27Q6MZM9 219 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 NOTUMQ6P988 496 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 ZNF841Q6ZN19 808 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 ADGRA1Q86SQ6 560 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 SLC25A42Q86VD7 318 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 FAM131BQ86XD5 332 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 OR7A2PQ8NGA2 310 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 NSUN4Q96CB9 384 aaKnown RBP2.61□□□□□ -1.99
TRAV40-201ENST00000390467 EVI5LQ96CN4 794 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 TMCO6Q96DC7 493 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 FAM71F1Q96KD3 344 aaPredicted RBP2.61□□□□□ -1.99
TRAV40-201ENST00000390467 C1orf147Q96MC9 270 aaPredicted RBP2.61□□□□□ -1.99
TRAV40-201ENST00000390467 BLOC1S4Q9NUP1 217 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 VPS28Q9UK41 221 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 STYXL1Q9Y6J8 313 aa2.61□□□□□ -1.99
TRAV40-201ENST00000390467 IGHV4-30-2A0A087WSY4 118 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TRBV4-1A0A0J9YWV2 114 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 KLLNB2CW77 178 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 K7EQD1 137 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 RAB40ALP0C0E4 278 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 SELEP16581 610 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 CAPGP40121 348 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 MATR3P43243 847 aaKnown RBP eCLIP2.6□□□□□ -1.99
TRAV40-201ENST00000390467 VAMP7P51809 220 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 NAP1L1P55209 391 aaKnown RBP2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TRA2BP62995 288 aaKnown RBP2.6□□□□□ -1.99
TRAV40-201ENST00000390467 MYL7Q01449 175 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 KLC1Q07866 573 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 HSPB3Q12988 150 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 CHAF1BQ13112 559 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TRA2AQ13595 282 aaKnown RBP eCLIP2.6□□□□□ -1.99
TRAV40-201ENST00000390467 VEZF1Q14119 521 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 PTPN14Q15678 1187 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 SNAPC1Q16533 368 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 CBWD6Q4V339 395 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 CBWD3Q5JTY5 395 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TIPARPQ7Z3E1 657 aaKnown RBP2.6□□□□□ -1.99
TRAV40-201ENST00000390467 ZER1Q7Z7L7 766 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TEX19Q8NA77 164 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 OR4K1Q8NGD4 311 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 PRPF31Q8WWY3 499 aaKnown RBP2.6□□□□□ -1.99
TRAV40-201ENST00000390467 ZNF597Q96LX8 424 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TIGD1Q96MW7 591 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 ZNF830Q96NB3 372 aaPredicted RBP2.6□□□□□ -1.99
TRAV40-201ENST00000390467 SEPHS2Q99611 448 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TEX12Q9BXU0 123 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 TUBB1Q9H4B7 451 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 HEXA-AS1Q9H8Q6 139 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 GIMAP4Q9NUV9 329 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 GDE1Q9NZC3 331 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 PCDHGB4Q9UN71 923 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 ITIH6Q6UXX5 1313 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 GON4LQ3T8J9 2241 aa2.6□□□□□ -1.99
TRAV40-201ENST00000390467 NOTCH2Q04721 2471 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 GLOD5A6NK44 160 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 C2CD4DB7Z1M9 353 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 TRIM77I1YAP6 450 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 PHF1O43189 567 aaPredicted RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 TLX2O43763 284 aaPredicted RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 KRT33AO76009 404 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 POP4O95707 220 aaKnown RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 BAG3O95817 575 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 GP9P14770 177 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 PFKFB1P16118 471 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 PORP16435 677 aaPredicted RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 ZFP36L2P47974 494 aaKnown RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 FCHO2Q0JRZ9 810 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 EPS8Q12929 822 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 BAATQ14032 418 aaPredicted RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 TRIM29Q14134 588 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 WTAPQ15007 396 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 MEA1Q16626 185 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 EIPR1Q53HC9 387 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 OR4A47Q6IF82 309 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 FAM198BQ6UWH4 519 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 LCLAT1Q6UWP7 414 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 CEACAM19Q7Z692 300 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 RPAP2Q8IXW5 612 aaPredicted RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 APPL2Q8NEU8 664 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 TYMSOSQ8TAI1 123 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 C9orf43Q8TAL5 461 aaPredicted RBP2.59□□□□□ -1.99
TRAV40-201ENST00000390467 NPRL2Q8WTW4 380 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 PIK3R3Q92569 461 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 TOMM40LQ969M1 308 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 SKA1Q96BD8 255 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 CALML4Q96GE6 196 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 ABHD1Q96SE0 405 aa2.59□□□□□ -1.99
TRAV40-201ENST00000390467 SDF4Q9BRK5 362 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms