RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 OR4E2Q8NGC2 313 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 GIMAP7Q8NHV1 300 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 UHMK1Q8TAS1 419 aaKnown RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 KCNJ9Q92806 393 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 FAM136AQ96C01 138 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 RMDN2Q96LZ7 410 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 PPM1MQ96MI6 270 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 PANX3Q96QZ0 392 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 ACSS3Q9H6R3 686 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 ZNF552Q9H707 407 aaPredicted RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 COPG1Q9Y678 874 aaKnown RBP11.7□□□□□ -0.54
LSM2-208ENST00000375661 COMMD10Q9Y6G5 202 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 AP1M2Q9Y6Q5 423 aa11.7□□□□□ -0.54
LSM2-208ENST00000375661 PRRC2CQ9Y520 2896 aaKnown RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 CROCCQ5TZA2 2017 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 RIPK2O43353 540 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 HNRNPRO43390 633 aaKnown RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 KLF7O75840 302 aaPredicted RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 FAM155BO75949 473 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 ABHD2P08910 425 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 ST6GAL1P15907 406 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 OTX2P32243 289 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 GP5P40197 560 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 CSE1LP55060 971 aaKnown RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 CDKN2DP55273 166 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 HSPA14Q0VDF9 509 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 RPA4Q13156 261 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 NAB1Q13506 487 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 BOP1Q14137 746 aaKnown RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 GBX1Q14549 363 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 PTCHD3Q3KNS1 767 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 HECTD2Q5U5R9 776 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 FAM69BQ5VUD6 431 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 FBXO38Q6PIJ6 1188 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 Q6ZS92 163 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 GALNT16Q8N428 558 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 AENQ8WTP8 325 aaKnown RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 ASZ1Q8WWH4 475 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 LCN9Q8WX39 176 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 MOCOSQ96EN8 888 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 CYTH2Q99418 400 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 GPR21Q99679 349 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 OLFM1Q99784 485 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 CPNE1Q99829 537 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 TSSK1BQ9BXA7 367 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 CCDC68Q9H2F9 335 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 SRMSQ9H3Y6 488 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 RHOJQ9H4E5 214 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 MTO1Q9Y2Z2 717 aaKnown RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 PCDHGA10Q9Y5H3 936 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 CENPEQ02224 2701 aa11.69□□□□□ -0.54
LSM2-208ENST00000375661 MDC1Q14676 2089 aaKnown RBP11.69□□□□□ -0.54
LSM2-208ENST00000375661 DOCK10Q96BY6 2186 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 GSAPA4D1B5 854 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 C2orf74A8MZ97 194 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 ZNF749O43361 778 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 SLCO2B1O94956 709 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 APOA4P06727 396 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 CD9P21926 228 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 FDXRP22570 491 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 ACADLP28330 430 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 FOLR3P41439 243 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 PGGT1BP53609 377 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 PLOD1Q02809 727 aaPredicted RBP11.68□□□□□ -0.54
LSM2-208ENST00000375661 RAPSNQ13702 412 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 UAP1Q16222 522 aaPredicted RBP11.68□□□□□ -0.54
LSM2-208ENST00000375661 ACSBG2Q5FVE4 666 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 GRTP1Q5TC63 336 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 OTOAQ7RTW8 1153 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 GPR135Q8IZ08 494 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 SLC22A15Q8IZD6 547 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 GPATCH11Q8N954 259 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 PROKR1Q8TCW9 393 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 CD200R1Q8TD46 325 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 NACC2Q96BF6 587 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 VPS39Q96JC1 886 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 TRAPPC9Q96Q05 1148 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 RBBP8Q99708 897 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 CHRNA10Q9GZZ6 450 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 TFB2MQ9H5Q4 396 aaKnown RBP11.68□□□□□ -0.54
LSM2-208ENST00000375661 KLHL42Q9P2K6 505 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 GPN3Q9UHW5 284 aaPredicted RBP11.68□□□□□ -0.54
LSM2-208ENST00000375661 CORO1CQ9ULV4 474 aaPredicted RBP11.68□□□□□ -0.54
LSM2-208ENST00000375661 ENTPD4Q9Y227 616 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 VWA7Q9Y334 891 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 DHRS7Q9Y394 339 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 POLEQ07864 2286 aa11.68□□□□□ -0.54
LSM2-208ENST00000375661 DIDO1Q9BTC0 2240 aaKnown RBP11.67□□□□□ -0.54
LSM2-208ENST00000375661 ABCA12Q86UK0 2595 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 A0A087WUV0 522 aaPredicted RBP11.67□□□□□ -0.54
LSM2-208ENST00000375661 FAM95CA0A1B0GW59 222 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 E5RI56 91 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 BTN3A1O00481 513 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 KPNA5O15131 536 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 VPS26AO75436 327 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 MCM3P25205 808 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 GLRBP48167 497 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 SLC29A2Q14542 456 aa11.67□□□□□ -0.54
LSM2-208ENST00000375661 SYTL3Q4VX76 610 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms