RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 GPR18Q14330 331 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 NEDD9Q14511 834 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PTGISQ16647 500 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CERKLQ49MI3 558 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TOR1AIP1Q5JTV8 583 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 WBP2NLQ6ICG8 309 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 KDELC1Q6UW63 502 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF704Q6ZNC4 412 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MAP7D3Q8IWC1 876 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 LAX1Q8IWV1 398 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ZC3H3Q8IXZ2 948 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CFAP206Q8IYR0 622 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PGBD5Q8N414 524 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 AMER3Q8N944 861 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 LRTM2Q8N967 370 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF548Q8NEK5 533 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 OR10Q1Q8NGQ4 319 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ELP5Q8TE02 316 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ARHGAP45Q92619 1136 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TAAR8Q969N4 342 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 URB1-AS1Q96HZ7 61 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 GFM1Q96RP9 751 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 NDNQ99608 321 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 THUMPD2Q9BTF0 503 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CARD6Q9BX69 1037 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TASP1Q9H6P5 420 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 Q9H8V8 135 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 C11orf21Q9P2W6 132 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 IL17BQ9UHF5 180 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 DNPEPQ9ULA0 475 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TMED7Q9Y3B3 224 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 LOXL2Q9Y4K0 774 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PTGDR2Q9Y5Y4 395 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 FANCAO15360 1455 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PRAG1Q86YV5 1406 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 LAMA2P24043 3122 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ANKRD17O75179 2603 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SMIM35A0A1B0GVV1 85 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 LINC01553A4QN01 128 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 E5RGE8 158 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 LRP3O75074 770 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MOSPD3O75425 235 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ATP6AP2O75787 350 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 KDM4BO94953 1096 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TNFRSF1BP20333 461 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 OR1D2P34982 312 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TRPC1P48995 793 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 DHPSP49366 369 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF132P52740 706 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TUBA4AP68366 448 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 HMGN5P82970 282 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ARF5P84085 180 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 AKAP17AQ02040 695 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TRAF3Q13114 568 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TYW3Q6IPR3 259 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TRIM65Q6PJ69 517 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 OLFML1Q6UWY5 402 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TPRG1Q6ZUI0 275 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 IL17RELQ6ZVW7 336 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ANKRD33Q7Z3H0 272 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 RTN4RL2Q86UN3 420 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 STHQ8IWL8 128 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM199Q8N511 208 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 C1orf52Q8N6N3 182 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PROX1Q92786 737 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 AZIN2Q96A70 460 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 MOB3AQ96BX8 217 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SNRNP40Q96DI7 357 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 FAM71F1Q96KD3 344 aaPredicted RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 C3orf30Q96M34 536 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 FAM20AQ96MK3 541 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CTAGE1Q96RT6 745 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ATG101Q9BSB4 218 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CRACR2AQ9BSW2 395 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 LMF2Q9BU23 707 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CALHM2Q9HA72 323 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CDH20Q9HBT6 801 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ACKR4Q9NPB9 350 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 SERINC1Q9NRX5 453 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ZCCHC3Q9NUD5 404 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 CNOT2Q9NZN8 540 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 RCC2Q9P258 522 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 NSG2Q9Y328 171 aa1.55□□□□□ -2.16
BRCA1-202ENST00000354071 PDS5AQ29RF7 1337 aaKnown RBP1.55□□□□□ -2.16
BRCA1-202ENST00000354071 ANK2Q01484 3957 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM89A2RUT3 159 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ANKRD61A6NGH8 418 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SRRM4A7MD48 611 aaKnown RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CYSRT1A8MQ03 144 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 NDC80O14777 642 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MLNRO43193 412 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 LIPFP07098 398 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 AREGP15514 252 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 GPD1P21695 349 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 PROZP22891 400 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CYP2F1P24903 491 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CHATP28329 748 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SOAT1P35610 550 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MMP15P51511 669 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 THOP1P52888 689 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms