RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 TPPPO94811 219 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PDGFAP04085 211 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 CKMT1AP12532 417 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 HOXA9P31269 272 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RPS5P46782 204 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 HSPA7P48741 367 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PRIM2P49643 509 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RORCP51449 518 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 CSNK2BP67870 215 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 CYP4F8P98187 520 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 TARDBPQ13148 414 aaKnown RBP eCLIP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 TATDN3Q17R31 274 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 FAM187BQ17R55 369 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 DCAF4L1Q3SXM0 396 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RUNDC3AQ59EK9 446 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 NADSYN1Q6IA69 706 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 CATSPERGQ6ZRH7 1159 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PLCZ1Q86YW0 608 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PHC2Q8IXK0 858 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 CHPFQ8IZ52 775 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PGBD5Q8N414 524 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 DNAJC22Q8N4W6 341 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 FBLIM1Q8WUP2 373 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 APH1BQ8WW43 257 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RNF170Q96K19 258 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SEMA3CQ99985 751 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 DERL2Q9GZP9 239 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 MYOZ2Q9NPC6 264 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PDGFCQ9NRA1 345 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ABI2Q9NYB9 513 aaPredicted RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ERVW-1Q9UQF0 538 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PIN4Q9Y237 131 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RWDD3Q9Y3V2 267 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SMIM28A0A1B0GU29 152 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ATP6V1G2-DDX39BF2Z307 99 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SCAMP3O14828 347 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 TREHO43280 583 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 OR1I1O60431 355 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 GJB3O75712 270 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ARHGEF15O94989 841 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 IL6P05231 212 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 RPS19P39019 145 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 TAGLNQ01995 201 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 ZRANB3Q5FWF4 1079 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SLC27A1Q6PCB7 646 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 KDELC1Q6UW63 502 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 AGMOQ6ZNB7 445 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PAQR9Q6ZVX9 377 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SLC34A3Q8N130 599 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 NKAPQ8N5F7 415 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 HSH2DQ96JZ2 352 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 OSMRQ99650 979 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SMOQ99835 787 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 C17orf62Q9BQA9 187 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PPIL3Q9H2H8 161 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 CRISPLD1Q9H336 500 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 HEBP1Q9NRV9 189 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 FARSBQ9NSD9 589 aaKnown RBP7.42□□□□□ -1.22
BRCA1-201ENST00000352993 SIRT5Q9NXA8 310 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 PCDHGA6Q9Y5G7 932 aa7.42□□□□□ -1.22
BRCA1-201ENST00000352993 LCHNA4D1U4 455 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 LEUTXA8MZ59 168 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 B4DXG7 233 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GFRA2O00451 464 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CACNG3O60359 315 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 MRPS14O60783 128 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 PSIP1O75475 530 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 RPP40O75818 363 aaKnown RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 HOXB8P17481 243 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 POU3F3P20264 500 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 NUDT1P36639 197 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GDF5P43026 501 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GZMKP49863 264 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 AP2S1P53680 142 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 LILRA4P59901 499 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GTF2H2Q13888 395 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 VEPH1Q14D04 833 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF284Q2VY69 593 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GTF2H2CQ6P1K8 395 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 TLK2Q86UE8 772 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZSWIM9Q86XI8 627 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CCDC117Q8IWD4 279 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 MSRB3Q8IXL7 192 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 TMEM203Q969S6 136 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 PCED1BQ96HM7 432 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ZNF556Q9HAH1 456 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 NLKQ9UBE8 527 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 RPS6KA6Q9UK32 745 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CMAHPQ9Y471 501 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 IQCF5A8MTL0 148 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 LZTS3O60299 673 aaPredicted RBP7.41□□□□□ -1.22
BRCA1-201ENST00000352993 PLOD3O60568 738 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 ULK1O75385 1050 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CDRT1O95170 752 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 CCNDBP1O95273 360 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 TNNI3P19429 210 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 SOX3P41225 446 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 PNPLA4P41247 253 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 GNPDA1P46926 289 aa7.41□□□□□ -1.22
BRCA1-201ENST00000352993 NRIP1P48552 1158 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms