RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 KHNYNO15037 678 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CYTIPO60759 359 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SNCAP37840 140 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF81P51508 661 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CDK3Q00526 305 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 IKBKEQ14164 716 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PRAMEF17Q5VTA0 474 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 FIGNL1Q6PIW4 674 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DLK2Q6UY11 383 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PPM1KQ8N3J5 372 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OR2M4Q96R27 311 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PCGF1Q9BSM1 259 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 C1QTNF7Q9BXJ2 289 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OAS3Q9Y6K5 1087 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CCDC88CQ9P219 2028 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NPIPA5E9PKD4 350 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NPIPA3F8WFD2 350 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MID1O15344 667 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CTDSPL2Q05D32 466 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TGM3Q08188 693 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 FNBP1LQ5T0N5 605 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OTOP3Q7RTS5 596 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ABI1Q8IZP0 508 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF615Q8N8J6 731 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PTGES2Q9H7Z7 377 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NPIPA1Q9UND3 350 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TMX2Q9Y320 296 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 A0A0G2JMP0 313 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 C3orf70A6NLC5 250 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TOXO94900 526 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 METTL15P1P0C7V9 234 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TGM1P22735 817 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SCGB2A2Q13296 93 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MTF1Q14872 753 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SEC23BQ15437 767 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OR4M2Q8NGB6 313 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZCCHC14Q8WYQ9 949 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HGDQ93099 445 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 KIAA1191Q96A73 305 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 DCUN1D1Q96GG9 259 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 COL21A1Q96P44 957 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TECTBQ96PL2 329 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SLC9A7Q96T83 725 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TAS2R13Q9NYV9 303 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SLCO3A1Q9UIG8 710 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PCDHA4Q9UN74 947 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ANGPT4Q9Y264 503 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GPAA1O43292 621 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ANXA9O76027 345 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MATN4O95460 622 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CSF1P09603 554 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HIST1H2AGP0C0S8 130 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TFPTP0C1Z6 253 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HIST1H2ADP20671 130 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GCAP28676 217 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 STT3AP46977 705 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RNF151Q2KHN1 245 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PRAMEF13Q5VWM6 474 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 TAS1R3Q7RTX0 852 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HPSE2Q8WWQ2 592 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZC3HAV1LQ96H79 300 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PPP1R16AQ96I34 528 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HIST1H2AHQ96KK5 128 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HIST1H2AJQ99878 128 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 H2AFJQ9BTM1 129 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RSAD1Q9HA92 442 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CLIC1O00299 241 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 FOXD2O60548 495 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 C21orf58P58505 322 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 KIAA0895Q8NCT3 520 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 OR6F1Q8NGZ6 308 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CHTF18Q8WVB6 975 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NFKBIZQ9BYH8 718 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 MCOLN1Q9GZU1 580 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 INIPQ9NRY2 104 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NAALADL1Q9UQQ1 740 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 SLC27A6Q9Y2P4 619 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PCDHGB7Q9Y5F8 929 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ITGB1BP1O14713 200 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PSAPP07602 524 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PPP3CAQ08209 521 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PMS2P3Q13401 168 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ALG11Q2TAA5 492 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 NKAIN1Q4KMZ8 207 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 KCTD8Q6ZWB6 473 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ZNF367Q7RTV3 350 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 GTPBP8Q8N3Z3 284 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 PAGE5Q96GU1 130 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 ESRP2Q9H6T0 727 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 KLHL8Q9P2G9 620 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LRRC14BA6NHZ5 514 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 HEXBP07686 556 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 JUPP14923 745 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 COILP38432 576 aaPredicted RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 RPL35P42766 123 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 LIPEQ05469 1076 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 C14orf28Q4W4Y0 310 aa3.68□□□□□ -1.82
SYNE2-202ENST00000344113 FNDC3BQ53EP0 1204 aaKnown RBP3.68□□□□□ -1.82
SYNE2-202ENST00000344113 USP17L1Q7RTZ2 530 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms