RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 C9orf135Q5VTT2 229 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 C11orf65Q8NCR3 313 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 OR4K1Q8NGD4 311 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 GFM1Q96RP9 751 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SLC39A3Q9BRY0 314 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 NLGN3Q9NZ94 848 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SYNPO2Q9UMS6 1093 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RNF13O43567 381 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PEPDP12955 493 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 GMPRP36959 345 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PITX1P78337 314 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 EID2Q8N6I1 236 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 MTMR14Q8NCE2 650 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 C2orf15Q8WU43 125 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ATXN2LQ8WWM7 1075 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 HTRA1Q92743 480 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 MYDGFQ969H8 173 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 IGSF8Q969P0 613 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PRTFDC1Q9NRG1 225 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 REXO2Q9Y3B8 237 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 J3QLW9 94 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 TOR1BO14657 336 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 KDELR3O43731 214 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PEX14O75381 377 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF19P17023 458 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ENGP17813 658 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CFL1P23528 166 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 OR1E2P47887 323 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CASP6P55212 293 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RIPK1Q13546 671 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 FBXO46Q6PJ61 603 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 VHLLQ6RSH7 139 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ARPINQ7Z6K5 226 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 OR8K5Q8NH50 307 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ZDHHC1Q8WTX9 485 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SLC38A4Q969I6 547 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ACDQ96AP0 544 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CHCHD6Q9BRQ6 235 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 TMED9Q9BVK6 235 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 DNAJC27Q9NZQ0 273 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ECI2O75521 394 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SEC24AO95486 1093 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ITGA5P08648 1049 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF41P51814 821 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 FOXK1P85037 733 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 SOX4Q06945 474 aaPredicted RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 DHCR24Q15392 516 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 GPR153Q6NV75 609 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 PRR18Q8N4B5 295 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CAMKVQ8NCB2 501 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 NSMAFQ92636 917 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 CDKN2AIPNLQ96HQ2 116 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 TRIM2Q9C040 744 aa7.6□□□□□ -1.19
SCN9A-201ENST00000303354 FBRSL1Q9HCM7 1045 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 RBMX2Q9Y388 322 aaKnown RBP7.6□□□□□ -1.19
SCN9A-201ENST00000303354 FAM72CH0Y354 149 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 KMOO15229 486 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SYNGR4O95473 234 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SNHG28P0DPA3 235 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 GABRA3P34903 492 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 AIF1P55008 147 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CORO7P57737 925 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ARF3P61204 181 aaPredicted RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ARF1P84077 181 aaKnown RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 DSG2Q14126 1118 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 FAM72AQ5TYM5 149 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 FAM72DQ6L9T8 149 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 NEK5Q6P3R8 708 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 FAM72BQ86X60 149 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF101Q8IZC7 436 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 COMMD4Q9H0A8 199 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 TAS2R1Q9NYW7 299 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ATP5A1P25705 553 aaKnown RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 PDK3Q15120 406 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 BMT2Q1RMZ1 405 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF311Q5JNZ3 666 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 OR5T2Q8NGG2 359 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 RGMAQ96B86 450 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ZFP3Q96NJ6 502 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 NSUN3Q9H649 340 aaKnown RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CCNB1IP1Q9NPC3 277 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 PCDHGC3Q9UN70 934 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 PLEKHA6Q9Y2H5 1048 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 C6orf47O95873 294 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CREB1P16220 341 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ITGA1P56199 1179 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ARRDC3Q96B67 414 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 BARD1Q99728 777 aaKnown RBP7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SLC32A1Q9H598 525 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ASB3Q9Y575 518 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 hCG_1807616A0A1W2PRN6 198 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 CCDC182A6NF36 153 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ZSCAN5BA6NJL1 495 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 ALOX15BO15296 676 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SYPP08247 313 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 IDH3AP50213 366 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 FUT2Q10981 343 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 SMCO1Q147U7 214 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 GPRC6AQ5T6X5 926 aa7.59□□□□□ -1.19
SCN9A-201ENST00000303354 LRRC38Q5VT99 294 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms