RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 TTC34A8MYJ7 566 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 M0QX08 132 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 PPIBP23284 216 aaKnown RBP13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ARF5P84085 180 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 CDKL1Q00532 357 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 TMEM115Q12893 351 aaPredicted RBP13.93□□□□□ -0.18
TMEM47-201ENST00000275954 SNAP47Q5SQN1 464 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 GCNT6Q5T4J0 391 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 RETREG3Q86VR2 466 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 AMZ2Q86W34 360 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 MTERF3Q96E29 417 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ATOH8Q96SQ7 321 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 TPT1P8Q9HAU6 139 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 IL36AQ9UHA7 158 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 RWDD3Q9Y3V2 267 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 KRT87PA6NCN2 255 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 HEPACAM2A8MVW5 462 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ITGA2P17301 1181 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ACRV1P26436 265 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 RFC2P35250 354 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ARSFP54793 590 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 AP1S2P56377 157 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 PARGQ86W56 976 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 MRPL43Q8N983 215 aaKnown RBP13.93□□□□□ -0.18
TMEM47-201ENST00000275954 UBXN10Q96LJ8 280 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 FAIM2Q9BWQ8 316 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 TOR3AQ9H497 397 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 SDR39U1Q9NRG7 319 aaPredicted RBP13.93□□□□□ -0.18
TMEM47-201ENST00000275954 SMOXQ9NWM0 555 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 BACE2Q9Y5Z0 518 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 PAPPA2Q9BXP8 1791 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 CARNS1A5YM72 827 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 WASH4PA8MWX3 477 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 RGS10O43665 173 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 MED26O95402 600 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 MYL12AP19105 171 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 OXTRP30559 389 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ERICH5Q6P6B1 374 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 PGM2L1Q6PCE3 622 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 VITQ6UXI7 678 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 RFLNAQ6ZTI6 216 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 VN1R5Q7Z5H4 357 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 SLC34A3Q8N130 599 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 KAT2AQ92830 837 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 USP7Q93009 1102 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 MYEOVQ96EZ4 313 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 C12orf66Q96MD2 445 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 DPH2Q9BQC3 489 aaPredicted RBP13.93□□□□□ -0.18
TMEM47-201ENST00000275954 FNDC11Q9BVV2 318 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 PHPT1Q9NRX4 125 aaPredicted RBP13.93□□□□□ -0.18
TMEM47-201ENST00000275954 USP22Q9UPT9 525 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ITM2BQ9Y287 266 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 NCKAP1Q9Y2A7 1128 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 ZNF451Q9Y4E5 1061 aa13.93□□□□□ -0.18
TMEM47-201ENST00000275954 DNTTP04053 509 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 APODP05090 189 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 HPGDP15428 266 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 CLCNKAP51800 687 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 RGS21Q2M5E4 152 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 CRTC1Q6UUV9 634 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 TMEM207Q6UWW9 146 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 SLC43A3Q8NBI5 491 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 GPR26Q8NDV2 337 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 IL17FQ96PD4 163 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 ATXN10Q9UBB4 475 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 WDR87Q6ZQQ6 2873 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 J3QRK9 145 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 UBFD1O14562 309 aaKnown RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 XPNPEP2O43895 674 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 VIPR1P32241 457 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 RPL3P39023 403 aaKnown RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 OR1E2P47887 323 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 SEPHS1P49903 392 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 INAQ16352 499 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 ARMC4Q5T2S8 1044 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 LMNTD1Q8N9Z9 388 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 NUDT8Q8WV74 236 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 GATA6Q92908 595 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 FBXL8Q96CD0 374 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 TAC3Q9UHF0 121 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 CORO2BQ9UQ03 480 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 MAGED1Q9Y5V3 778 aaPredicted RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 RANBP2P49792 3224 aaKnown RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 A0A1W2PRB8 838 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 EFCAB10A6NFE3 127 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 GPX3P22352 226 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 EIF2B2P49770 351 aaKnown RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 CCR4P51679 360 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 CLCN4P51793 760 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 ZNF140P52738 457 aaPredicted RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 MGAT3Q09327 533 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 IER5LQ5T953 404 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 NOXRED1Q6NXP6 359 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 GPR65Q8IYL9 337 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 TPSD1Q9BZJ3 242 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 RPF2Q9H7B2 306 aaKnown RBP13.92□□□□□ -0.18
TMEM47-201ENST00000275954 ETAA1Q9NY74 926 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 MAPRE3Q9UPY8 281 aa13.92□□□□□ -0.18
TMEM47-201ENST00000275954 SHROOM3Q8TF72 1996 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms