RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 NUP205Q92621 2012 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 COL1A2P08123 1366 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC35F4A4IF30 521 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 HNRNPCL2B2RXH8 293 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 TMEM233B4DJY2 109 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 NT5C1B-RDH14C9J2C7 533 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 PSIP1O75475 530 aaKnown RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 NFKB1P19838 968 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 EFNA1P20827 205 aaPredicted RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 SAT1P21673 171 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 NMBRP28336 390 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 BRCC3P46736 316 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 GLRBP48167 497 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 RAB13P51153 203 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 RRAS2P62070 204 aaPredicted RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 KEAP1Q14145 624 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 TBCEQ15813 527 aaPredicted RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 EML3Q32P44 896 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 FAM98BQ52LJ0 330 aaKnown RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC27A1Q6PCB7 646 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 KCNMB4Q86W47 210 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 PSTKQ8IV42 348 aaKnown RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 MFSD6LQ8IWD5 586 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 TSPEARQ8WU66 669 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF419Q96HQ0 510 aaPredicted RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC2A13Q96QE2 648 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 NPAS1Q99742 590 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 TTPALQ9BTX7 342 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 SRRQ9GZT4 340 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 KATNBL1Q9H079 304 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 PPIL3Q9H2H8 161 aaKnown RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 TMEM30AQ9NV96 361 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 CD274Q9NZQ7 290 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 MAP10Q9P2G4 905 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 DNAJB9Q9UBS3 223 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC39A10Q9ULF5 831 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 ZFR2Q9UPR6 939 aaKnown RBP7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 PCDHB5Q9Y5E4 795 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 V9GYH0 126 aa7.31□□□□□ -1.24
TRIM49B-202ENST00000622138 A0A0A6YYJ9 748 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TRAV20A0A0B4J274 112 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 A0A0J9YYE9 177 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SMIM28A0A1B0GU29 152 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 A0A1W2PQ09 198 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 H3BRB1 525 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 MYL12BO14950 172 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 INPPL1O15357 1258 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TSC22D2O75157 780 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GPR32O75388 356 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 VPS26AO75436 327 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 MATN4O95460 622 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 HOXD8P13378 290 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SYN1P17600 705 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 MYL12AP19105 171 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GPX3P22352 226 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GADD45AP24522 165 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 RPL35P42766 123 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 AKR1D1P51857 326 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 HK3P52790 923 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 LIMK1P53667 647 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SNX16P57768 344 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 DNAJB13P59910 316 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 RPP38P78345 283 aaKnown RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GRIK2Q13002 908 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 IRF3Q14653 427 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GRM7Q14831 915 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 POU4F3Q15319 338 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ZNF124Q15973 351 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 IQCCQ4KMZ1 466 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TSTD2Q5T7W7 516 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GPR158Q5T848 1215 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CNSTQ6PJW8 725 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 KDELC1Q6UW63 502 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 C11orf96Q7Z7L8 435 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 STX12Q86Y82 276 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 FUNDC1Q8IVP5 155 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SPATA6LQ8N4H0 392 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 DNAAF3Q8N9W5 541 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 B3GALNT2Q8NCR0 500 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 OR6M1Q8NGM8 313 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CNIH3Q8TBE1 160 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TMEM40Q8WWA1 233 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 WNT8BQ93098 351 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 PYCR2Q96C36 320 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 LRRC58Q96CX6 371 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 C11orf24Q96F05 449 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SLC9A7Q96T83 725 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GAL3ST1Q99999 423 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 SPOCK3Q9BQ16 436 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 CLEC4MQ9H2X3 399 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 PIGUQ9H490 435 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 TASP1Q9H6P5 420 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 RANBP3Q9H6Z4 567 aaPredicted RBP7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 IL1RAPQ9NPH3 570 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 GTSE1Q9NYZ3 720 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 KCNK7Q9Y2U2 307 aa7.3□□□□□ -1.24
TRIM49B-202ENST00000622138 ALG5Q9Y673 324 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms