RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 IL17FQ96PD4 163 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 GABRG3Q99928 467 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 SGPP1Q9BX95 441 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 SPATA6Q9NWH7 488 aaPredicted RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 VPS29Q9UBQ0 182 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 PPT2Q9UMR5 302 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 SNX13Q9Y5W8 968 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 MAGEB17A8MXT2 336 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 KLF8O95600 359 aaPredicted RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 COL9A1P20849 921 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 SF1Q15637 639 aaKnown RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 UNC5DQ6UXZ4 953 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 PRR23BQ6ZRT6 265 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 TMEM126BQ8IUX1 230 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 LRRC56Q8IYG6 542 aaPredicted RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR7G3Q8NG95 312 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 GFM2Q969S9 779 aaKnown RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 SEMA6AQ9H2E6 1030 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 PRM3Q9NNZ6 103 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 GPRC5BQ9NZH0 403 aa16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 CFAP20Q9Y6A4 193 aaKnown RBP16.78■□□□□ 0.28
PCDHGC3-205ENST00000617641 NUMA1Q14980 2115 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 A0A1W2PQF6 199 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 AQP12BA6NM10 295 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 ETHE1O95571 254 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 PNLIPRP1P54315 467 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 OR4D2P58180 307 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 ZNF33BQ06732 778 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 SDE2Q6IQ49 451 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 PTRH1Q86Y79 214 aaKnown RBP16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 AQP12AQ8IXF9 295 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 C2orf73Q8N5S3 287 aaPredicted RBP16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 SMRP1Q8NCR6 262 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 ITM2CQ9NQX7 267 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 DYRK1BQ9Y463 629 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 PCDHGA11Q9Y5H2 935 aa16.77■□□□□ 0.28
PCDHGC3-205ENST00000617641 F5P12259 2224 aa16.77■□□□□ 0.27
PCDHGC3-205ENST00000617641 A0A1W2PQU0 124 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 B3GALT4O96024 378 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 DNTTP04053 509 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 HOXB2P14652 356 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 TRIM23P36406 574 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 RPS21P63220 83 aaKnown RBP16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 RPA4Q13156 261 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 SGCGQ13326 291 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 PGS1Q32NB8 556 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 TICAM1Q8IUC6 712 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 MSRB3Q8IXL7 192 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 OXR1Q8N573 874 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 HUS1BQ8NHY5 278 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 TFGQ92734 400 aaPredicted RBP16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 FCRL1Q96LA6 429 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 NRTNQ99748 197 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 SLC25A37Q9NYZ2 338 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 AURKCQ9UQB9 309 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 TDRKHQ9Y2W6 561 aaKnown RBP16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 CROCCQ5TZA2 2017 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 DHRS12A0PJE2 317 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 PLRG1O43660 514 aaKnown RBP16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 TIPRLO75663 272 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 HTR1EP28566 365 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 S100A3P33764 101 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 E2F2Q14209 437 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 GTDC1Q4AE62 458 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 IRGCQ6NXR0 463 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 AMIGO2Q86SJ2 522 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 ICA1LQ8NDH6 482 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 ADCY4Q8NFM4 1077 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 C1QTNF2Q9BXJ5 285 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 MUC13Q9H3R2 512 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 CCDC177Q9NQR7 707 aaPredicted RBP16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 SLC6A13Q9NSD5 602 aa16.76■□□□□ 0.27
PCDHGC3-205ENST00000617641 BRWD1Q9NSI6 2320 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 KMOO15229 486 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 AKAP10O43572 662 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 RNGTTO60942 597 aaKnown RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 FUCA1P04066 466 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 ACPPP15309 386 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 RPL10P27635 214 aaKnown RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 OXTRP30559 389 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 MAT2AP31153 395 aaKnown RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 KLC1Q07866 573 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 SLBPQ14493 270 aaKnown RBP eCLIP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 THEMIS2Q5TEJ8 643 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 METRNLQ641Q3 311 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 HMBOX1Q6NT76 420 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 MED27Q6P2C8 311 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 ANKRD46Q86W74 232 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 SYT12Q8IV01 421 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 RIMKLAQ8IXN7 391 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 FAM9CQ8IZT9 166 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 OR8J3Q8NGG0 315 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 EFHD1Q9BUP0 239 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 IKZF5Q9H5V7 419 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 BRF2Q9HAW0 419 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 FZD3Q9NPG1 666 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 CCM2LQ9NUG4 571 aaPredicted RBP16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 HRH2P25021 359 aa16.75■□□□□ 0.27
PCDHGC3-205ENST00000617641 ADPRHP54922 357 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms