RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 OR1I1O60431 355 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 KRT33AO76009 404 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 STATHP02808 62 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 GBAP04062 536 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 PGRP06401 933 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 FSHRP23945 695 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 ECHS1P30084 290 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 MXD1Q05195 221 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 SLC13A2Q13183 592 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 SIX1Q15475 284 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 LDLRAD1Q5T700 205 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 AGTRAPQ6RW13 159 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 ATP6V1C2Q8NEY4 427 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 BPIFB1Q8TDL5 484 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 KBTBD7Q8WVZ9 684 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 KCNJ9Q92806 393 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 SCAMP4Q969E2 229 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 ARMC5Q96C12 935 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 EXO5Q9H790 373 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 MCUBQ9NWR8 336 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 RNF11Q9Y3C5 154 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 MYH13Q9UKX3 1938 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 A0A1W2PP18 115 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 LEFTY2O00292 366 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 ATF4P18848 351 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 IVDP26440 423 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 DIO3P55073 304 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 TARDBPQ13148 414 aaKnown RBP eCLIP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 CXorf57Q6NSI4 855 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 B3GNT9Q6UX72 402 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 NUDT13Q86X67 352 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 UMODL1-AS1Q8N2C9 162 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 COX18Q8N8Q8 333 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 OR5K1Q8NHB7 308 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 PIGXQ8TBF5 258 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 HMGB4Q8WW32 186 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 MRGPRX2Q96LB1 330 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 MCCC1Q96RQ3 725 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 COPS4Q9BT78 406 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 EVA1BQ9NVM1 165 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 CALML5Q9NZT1 146 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 FZD4Q9ULV1 537 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 ANKRD33BA6NCL7 494 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 ERI3O43414 337 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 AZGP1P25311 298 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 PREPP48147 710 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 CCR8P51685 355 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 NCBP2P52298 156 aaKnown RBP eCLIP12.2□□□□□ -0.467e-14■■□□□ 14.3
TNFAIP3-206ENST00000612899 DSC3Q14574 896 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 RUNDC3AQ59EK9 446 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 MBOAT1Q6ZNC8 495 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 LRRC70Q7Z2Q7 622 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 LRRTM4Q86VH4 590 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 CELF5Q8N6W0 485 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 DNAJB8Q8NHS0 232 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 IMP4Q96G21 291 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 GAS2L1Q99501 681 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 PKP2Q99959 881 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 FLRT1Q9NZU1 646 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 CCDC59Q9P031 241 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 FAM92AA1XBS5 289 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 RHPN2P1A8MT19 583 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 CHRNA1P02708 482 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 HOXD12P35452 270 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 ZNF678Q5SXM1 525 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 RPTNQ6XPR3 784 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 THOC6Q86W42 341 aaKnown RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 IFNLR1Q8IU57 520 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 TOR1AIP2Q8NFQ8 470 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 GPR151Q8TDV0 419 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 SLC35A5Q9BS91 424 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 OR51V1Q9H2C8 321 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 OR51B5Q9H339 312 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 NKIRAS2Q9NYR9 191 aa12.2□□□□□ -0.46
TNFAIP3-206ENST00000612899 MYH6P13533 1939 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PSIP1O75475 530 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 RB1P06400 928 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 OMPP47874 163 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PPP1R3AQ16821 1122 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 NXPE1Q8N323 547 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PMEPA1Q969W9 287 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 C10orf71Q711Q0 1435 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 TOR1BO14657 336 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 SSNA1O43805 119 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 CAPN15O75808 1086 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 CDH1P12830 882 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PORP16435 677 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 ZNF30P17039 623 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 AKT2P31751 481 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 IGFALSP35858 605 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 STK19P49842 368 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 PGDP52209 483 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 CRISP3P54108 245 aa12.19□□□□□ -0.46
TNFAIP3-206ENST00000612899 SCARB2Q14108 478 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms