RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 SNAP29O95721 258 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 C9P02748 559 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 RPS17P08708 135 aaKnown RBP13.92□□□□□ -0.18
LINC02538-201ENST00000609107 GPX3P22352 226 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 PSMA1P25786 263 aaKnown RBP13.92□□□□□ -0.18
LINC02538-201ENST00000609107 GABRB3P28472 473 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 GKP32189 559 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 MAGEA12P43365 314 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 LSAMPQ13449 338 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 ABRAXAS2Q15018 415 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 PCBP2Q15366 365 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC02538-201ENST00000609107 CES5AQ6NT32 575 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 RBM23Q86U06 439 aaKnown RBP13.92□□□□□ -0.18
LINC02538-201ENST00000609107 ING5Q8WYH8 240 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 NUS1Q96E22 293 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 SLC39A13Q96H72 371 aa13.92□□□□□ -0.18
LINC02538-201ENST00000609107 LEFTY2O00292 366 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 PRSS56P0CW18 603 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 TNNI3P19429 210 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 KCNA5P22460 613 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 OR4D2P58180 307 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 MZT2BQ6NZ67 158 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 GJD3Q8N144 294 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 GTPBP3Q969Y2 492 aaKnown RBP13.91□□□□□ -0.18
LINC02538-201ENST00000609107 ZBED6CLQ96FA7 236 aaPredicted RBP13.91□□□□□ -0.18
LINC02538-201ENST00000609107 ERVW-1Q9UQF0 538 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 MYOCOSA0A1B0GUC4 107 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 BCKDHAP12694 445 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 CENPAP49450 140 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 LMAN2Q12907 356 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 ZNHIT3Q15649 155 aaPredicted RBP13.91□□□□□ -0.18
LINC02538-201ENST00000609107 MBOAT1Q6ZNC8 495 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 AMZ2Q86W34 360 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 ADAMTS15Q8TE58 950 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 MUS81Q96NY9 551 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 SMAD5Q99717 465 aaKnown RBP13.91□□□□□ -0.18
LINC02538-201ENST00000609107 SLC35A5Q9BS91 424 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 HHLA1C9JL84 531 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 SOCS2O14508 198 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 APODP05090 189 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 HOXC13P31276 330 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 BNIP3Q12983 259 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 EIF2B5Q13144 721 aaKnown RBP13.91□□□□□ -0.18
LINC02538-201ENST00000609107 SF1Q15637 639 aaKnown RBP13.91□□□□□ -0.18
LINC02538-201ENST00000609107 OR52E8Q6IFG1 317 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 SMURF2Q9HAU4 748 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 TDP1Q9NUW8 608 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 C2orf78A6NCI8 922 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 OR1F1O43749 312 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 TMCC2O75069 709 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 DNTTP04053 509 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 PCCBP05166 539 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 ERVPABLB-1P60509 514 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 DSC3Q14574 896 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 LIPJQ5W064 366 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 NPAS3Q8IXF0 933 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 PNPLA1Q8N8W4 532 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 SLC38A4Q969I6 547 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 ISOC1Q96CN7 298 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 GPATCH1Q9BRR8 931 aaKnown RBP13.91□□□□□ -0.18
LINC02538-201ENST00000609107 SMOXQ9NWM0 555 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 CMTM6Q9NX76 183 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 PEX16Q9Y5Y5 336 aa13.91□□□□□ -0.18
LINC02538-201ENST00000609107 GRXCR2A6NFK2 248 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 GSRP00390 522 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 RPLP0P05388 317 aaKnown RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 IL7RP16871 459 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 HSPB3Q12988 150 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 PPIGQ13427 754 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 NOXRED1Q6NXP6 359 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 MAVSQ7Z434 540 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 CMTR2Q8IYT2 770 aaKnown RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 HSH2DQ96JZ2 352 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 CHCHD6Q9BRQ6 235 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 LIN28AQ9H9Z2 209 aaKnown RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 KLHL1Q9NR64 748 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 POFUT2Q9Y2G5 429 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 LOC110117498-PIK3R3F6TDL0 507 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 RPS3P23396 243 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 FEN1P39748 380 aaKnown RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 MEP1AQ16819 746 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 SMU1Q2TAY7 513 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 LGI4Q8N135 537 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 C9orf43Q8TAL5 461 aaPredicted RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 CD200R1Q8TD46 325 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 GEMIN6Q8WXD5 167 aaKnown RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 RERGQ96A58 199 aaPredicted RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 UBXN10Q96LJ8 280 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 IL17CQ9P0M4 197 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 SPATA7Q9P0W8 599 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 TGFB1P01137 390 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 MYF6P23409 242 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 ZNF140P52738 457 aaPredicted RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 COX10Q12887 443 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 PRAMEF14Q5SWL7 426 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 C10orf62Q5T681 223 aaPredicted RBP13.9□□□□□ -0.18
LINC02538-201ENST00000609107 PRAMEF13Q5VWM6 474 aa13.9□□□□□ -0.18
LINC02538-201ENST00000609107 ZNF544Q6NX49 715 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms