RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GPS2Q13227 327 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 CUL1Q13616 776 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 FASTKD3Q14CZ7 662 aaKnown RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 CYP2A13Q16696 494 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 KLHL38Q2WGJ6 581 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ELOA3BQ3SY89 546 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 TEDDM1Q5T9Z0 273 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 PRAMEF17Q5VTA0 474 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 TRMT10BQ6PF06 316 aaKnown RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 KIAA0408Q6ZU52 694 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 FAM20CQ8IXL6 584 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ELOA3Q8NG57 546 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 CT55Q8WUE5 264 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 SKA2Q8WVK7 121 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 TCTN2Q96GX1 697 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 FOPNLQ96NB1 174 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 GPR21Q99679 349 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ERP44Q9BS26 406 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 EFHD1Q9BUP0 239 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 AKIRIN1Q9H9L7 192 aaPredicted RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 FANCEQ9HB96 536 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ZFP64Q9NPA5 681 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 LHX9Q9NQ69 397 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 SPATA7Q9P0W8 599 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 SLC17A6Q9P2U8 582 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 ZC3H7BQ9UGR2 993 aaKnown RBP10.79□□□□□ -0.68
SMAD4-211ENST00000590499 PADI1Q9ULC6 663 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 SNX24Q9Y343 169 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 DHRS7Q9Y394 339 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 PCDHGA6Q9Y5G7 932 aa10.79□□□□□ -0.68
SMAD4-211ENST00000590499 HELZ2Q9BYK8 2649 aaKnown RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 ISM1B1AKI9 464 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 EIF3FO00303 357 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 NKX2-8O15522 239 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 AHSGP02765 367 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 MPC1LP0DKB6 136 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 ENO3P13929 434 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 MAGP20916 626 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 DLSTP36957 453 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 ITGA1P56199 1179 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 TBR1Q16650 682 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 TTLL9Q3SXZ7 439 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 HP1BP3Q5SSJ5 553 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 DUPD1Q68J44 220 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 CYHR1Q6ZMK1 362 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 TAX1BP1Q86VP1 789 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 TMEM126BQ8IUX1 230 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 DNAJC22Q8N4W6 341 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 C2orf73Q8N5S3 287 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 FBXO15Q8NCQ5 510 aaPredicted RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 MAGEC3Q8TD91 643 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 ASB11Q8WXH4 323 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 STARD8Q92502 1023 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 INPP5DQ92835 1189 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 SLC22A18Q96BI1 424 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 CFAP36Q96G28 342 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 SEMA4CQ9C0C4 833 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 CCDC68Q9H2F9 335 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 GRHL1Q9NZI5 618 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 WHRNQ9P202 907 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 SLC39A10Q9ULF5 831 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 KLK4Q9Y5K2 254 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 MRPS18BQ9Y676 258 aaKnown RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 CCDC88CQ9P219 2028 aa10.78□□□□□ -0.68
SMAD4-211ENST00000590499 MDC1Q14676 2089 aaKnown RBP10.78□□□□□ -0.68
SMAD4-211ENST00000590499 C21orf140B9A014 251 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 GFYI3L273 518 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 NDC80O14777 642 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 FKBP9O95302 570 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 PRB1P04280 392 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 CTSBP07858 339 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 CBSLP0DN79 551 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 ALAS2P22557 587 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 PSMB5P28074 263 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 OAS2P29728 719 aaKnown RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 CBSP35520 551 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 CARSP49589 748 aaKnown RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 CDC20Q12834 499 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 PDIA2Q13087 525 aaKnown RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 DNASE1L3Q13609 305 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 FASTKQ14296 549 aaKnown RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 DEFB110Q30KQ9 67 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 TAF1BQ53T94 588 aaPredicted RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 RBM20Q5T481 1227 aaKnown RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 FCRL6Q6DN72 434 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 TTC23LQ6PF05 361 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 PIWIL4Q7Z3Z4 852 aaKnown RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 MAATS1Q7Z4T9 603 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 ANKMY2Q8IV38 441 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 CPNE9Q8IYJ1 553 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 DSELQ8IZU8 1212 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 EXD3Q8N9H8 876 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 BBOF1Q8ND07 529 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 FBXO36Q8NEA4 188 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 OR2A1Q8NGT9 310 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 OR9A1PQ8NGU1 263 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 GABPB2Q8TAK5 448 aaPredicted RBP10.77□□□□□ -0.69
SMAD4-211ENST00000590499 EXTL1Q92935 676 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 RUFY1Q96T51 708 aa10.77□□□□□ -0.69
SMAD4-211ENST00000590499 PKP4Q99569 1192 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms