RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 NOVA2Q9UNW9 492 aaKnown RBP16.41■□□□□ 0.22
GCDH-206ENST00000587832 RUVBL2Q9Y230 463 aaKnown RBP16.41■□□□□ 0.22
GCDH-206ENST00000587832 NOTCH2Q04721 2471 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 CNTRLQ7Z7A1 2325 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 A0A1W2PQ72 361 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 VAPBO95292 243 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 MED26O95402 600 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 KIAA0930Q6ICG6 404 aaPredicted RBP16.4■□□□□ 0.22
GCDH-206ENST00000587832 LRRC8BQ6P9F7 803 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 SDCCAG8Q86SQ7 713 aaPredicted RBP16.4■□□□□ 0.22
GCDH-206ENST00000587832 MFSD3Q96ES6 412 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 C5orf34Q96MH7 638 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 ZFYVE21Q9BQ24 234 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 SOX17Q9H6I2 414 aaPredicted RBP16.4■□□□□ 0.22
GCDH-206ENST00000587832 EPS8L2Q9H6S3 715 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 SYBUQ9NX95 663 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 ZNF282Q9UDV7 671 aaPredicted RBP16.4■□□□□ 0.22
GCDH-206ENST00000587832 CSAG2Q9Y5P2 127 aa16.4■□□□□ 0.22
GCDH-206ENST00000587832 ITPR2Q14571 2701 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 LOC105369274A0A096LPK9 316 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 LOC102723532A0A0G2JNH3 316 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 A1L4Q6 167 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 KRT87PA6NCN2 255 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 GOLGA6L6A8MZA4 724 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 MYO1CO00159 1063 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 NRP2O60462 931 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 ALOX12BO75342 701 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 HPP00738 406 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 ACPPP15309 386 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 OGNP20774 298 aaKnown RBP16.39■□□□□ 0.21
GCDH-206ENST00000587832 MGAT1P26572 445 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 CMPK1P30085 196 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 GLRBP48167 497 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 OCA2Q04671 838 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 KLC1Q07866 573 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 ELOAQ14241 798 aaKnown RBP16.39■□□□□ 0.21
GCDH-206ENST00000587832 ZNF169Q14929 603 aaPredicted RBP16.39■□□□□ 0.21
GCDH-206ENST00000587832 ARHGAP19Q14CB8 494 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 HIF1AQ16665 826 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 MUM1Q2TAK8 710 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 PRTGQ2VWP7 1150 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 ZNF662Q6ZS27 426 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 SHISA6Q6ZSJ9 500 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 GSTA5Q7RTV2 222 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 OR4N4Q8N0Y3 316 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 DTWD1Q8N5C7 304 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 OTUD6BQ8N6M0 293 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 SPC24Q8NBT2 197 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 STT3BQ8TCJ2 826 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 MVB12AQ96EY5 273 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 C10orf90Q96M02 699 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 CRB3Q9BUF7 120 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 FAM114A2Q9NRY5 505 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 HOMER3Q9NSC5 361 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 VPS9D1Q9Y2B5 631 aa16.39■□□□□ 0.21
GCDH-206ENST00000587832 CENPEQ02224 2701 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 A0A0J9YVX5 310 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 ARHGEF33A8MVX0 844 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 NIPSNAP2O75323 286 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 PSIP1O75475 530 aaKnown RBP16.38■□□□□ 0.21
GCDH-206ENST00000587832 CLDN1O95832 211 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 ZGLP1P0C6A0 271 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 ERVK-10P10266 1014 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 MAGEA6P43360 314 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 RELAQ04206 551 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 Q0VFX4 171 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 TLR1Q15399 786 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 ANKRD20A4Q4UJ75 823 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.38■□□□□ 0.21
GCDH-206ENST00000587832 KCNMB4Q86W47 210 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 METTL27Q8N6F8 245 aaPredicted RBP16.38■□□□□ 0.21
GCDH-206ENST00000587832 OR9A1PQ8NGU1 263 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 DNAJB14Q8TBM8 379 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 SMPDL3AQ92484 453 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 MIEF2Q96C03 454 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 LMF1Q96S06 567 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 DPH7Q9BTV6 452 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 ZC3H7BQ9UGR2 993 aaKnown RBP16.38■□□□□ 0.21
GCDH-206ENST00000587832 MAU2Q9Y6X3 613 aa16.38■□□□□ 0.21
GCDH-206ENST00000587832 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.37■□□□□ 0.21
GCDH-206ENST00000587832 NBPF19A0A087WUL8 3843 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 E2F3O00716 465 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 MAP2K7O14733 419 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 PCDH17O14917 1159 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 PRPF4O43172 522 aaKnown RBP eCLIP16.37■□□□□ 0.211e-7■■□□□ 11.4
GCDH-206ENST00000587832 VPS26AO75436 327 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 FGGP02679 453 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 FMO4P31512 558 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 HSD17B2P37059 387 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 MFAP5Q13361 173 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 DSG2Q14126 1118 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 FASTKQ14296 549 aaKnown RBP16.37■□□□□ 0.21
GCDH-206ENST00000587832 ATG9BQ674R7 924 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 FBXO42Q6P3S6 717 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 ISLR2Q6UXK2 745 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 NEK10Q6ZWH5 1172 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 PAQR7Q86WK9 346 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 CILP2Q8IUL8 1156 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 PARP9Q8IXQ6 854 aa16.37■□□□□ 0.21
GCDH-206ENST00000587832 FBXO15Q8NCQ5 510 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms