RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SLC36A3Q495N2 470 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 ZNF311Q5JNZ3 666 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 LINGO4Q6UY18 593 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 TSPYL5Q86VY4 417 aaPredicted RBP10.12□□□□□ -0.79
PTPRM-205ENST00000577827 ADGRG5Q8IZF4 528 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 SUSD3Q96L08 255 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 CCDC32Q9BV29 185 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 LHPPQ9H008 270 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 RNF38Q9H0F5 515 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 TRIT1Q9H3H1 467 aaKnown RBP10.12□□□□□ -0.79
PTPRM-205ENST00000577827 BAIAP2Q9UQB8 552 aa10.12□□□□□ -0.79
PTPRM-205ENST00000577827 LOC730098B7Z3J9 87 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 FOXD2O60548 495 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 GABBR2O75899 941 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 OR5F1O95221 314 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 RABGGTBP53611 331 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CBLBQ13191 982 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 VARS2Q5ST30 1063 aaKnown RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 PRSS48Q7RTY5 328 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ZNF655Q8N720 491 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 GMLQ99445 158 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 C1QTNF7Q9BXJ2 289 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CD244Q9BZW8 370 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 MCUBQ9NWR8 336 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ERVK-18Q9QC07 812 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 UBR2Q8IWV8 1755 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 HTR3EA5X5Y0 456 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 VILLO15195 856 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ECDO95905 644 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CD247P20963 164 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ARL4DP49703 201 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 PLA2G16P53816 162 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 TARDBPQ13148 414 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 SGCGQ13326 291 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 SMU1Q2TAY7 513 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 SYVN1Q86TM6 617 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ISCA2Q86U28 154 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CNIH3Q8TBE1 160 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ZNF675Q8TD23 568 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ADAMTS15Q8TE58 950 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CXorf40AQ8TE69 158 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ACDQ96AP0 544 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ZBED6CLQ96FA7 236 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 PGAP3Q96FM1 320 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CNDP2Q96KP4 475 aaKnown RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 FCRL4Q96PJ5 515 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 YIPF2Q9BWQ6 316 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 DSN1Q9H410 356 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CRTAC1Q9NQ79 661 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 RBPJLQ9UBG7 517 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 AASSQ9UDR5 926 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 KCTD3Q9Y597 815 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 A0A1W2PRB8 838 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 BCAS1O75363 584 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 POP4O95707 220 aaKnown RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CAPN3P20807 821 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 DCKP27707 260 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ACSL1P33121 698 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 OR1D2P34982 312 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 NUDT6P53370 316 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 LARS2Q15031 903 aaKnown RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ZBTB6Q15916 424 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 TMEM236Q5W0B7 351 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CCBE1Q6UXH8 406 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 SLITRK4Q8IW52 837 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CLIP4Q8N3C7 705 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 FAM46DQ8NEK8 389 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 RNF39Q9H2S5 420 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 GPN2Q9H9Y4 310 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 PLCH1Q4KWH8 1693 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 MAFKO60675 156 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 EOMESO95936 686 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 HLA-DPB1P04440 258 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 RETP07949 1114 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 SLC35G4P0C7Q5 338 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 OMPP47874 163 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 RGS8P57771 180 aaPredicted RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 C9orf64Q5T6V5 341 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 RASSF6Q6ZTQ3 369 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 UPF1Q92900 1129 aaKnown RBP eCLIP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 B3GALT6Q96L58 329 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ZNF778Q96MU6 729 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 TRNT1Q96Q11 434 aaKnown RBP10.11□□□□□ -0.79
PTPRM-205ENST00000577827 MCMBPQ9BTE3 642 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 HERC2P3Q9BVR0 1158 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 UCK2Q9BZX2 261 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 IGSF5Q9NSI5 407 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 NKIRAS2Q9NYR9 191 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 ENPP5Q9UJA9 477 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 CMAHPQ9Y471 501 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 RGPD5Q99666 1765 aa10.11□□□□□ -0.79
PTPRM-205ENST00000577827 HCRTO43612 131 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 HMGN1P05114 100 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 EDNRBP24530 442 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 MAGEA3P43357 314 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 SH3BP2P78314 561 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 CDK6Q00534 326 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 VMACQ2NL98 169 aa10.1□□□□□ -0.79
PTPRM-205ENST00000577827 RANBP10Q6VN20 620 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms