RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	ARHGEF18	Q6ZSZ5	1173 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	OR4N4	Q8N0Y3	316 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	CFAP61	Q8NHU2	1237 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	ASZ1	Q8WWH4	475 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	ALS2CR12	Q96Q35	445 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	CARD6	Q9BX69	1037 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	OSBPL8	Q9BZF1	889 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	LRRC40	Q9H9A6	602 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	SLC39A10	Q9ULF5	831 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	MRPS2	Q9Y399	296 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	FAM169A	Q9Y6X4	670 aa		10.84	□□□□□ -0.67
TCF4-238	ENST00000568169	CELSR1	Q9NYQ6	3014 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	DNAJC13	O75165	2243 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169		A0A0J9YVX5	310 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	IDS	B3KWA1	339 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	NRP2	O60462	931 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	ZNF189	O75820	626 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	WFS1	O76024	890 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	WISP2	O76076	250 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	METTL18	O95568	372 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	F10	P00742	488 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	APOA4	P06727	396 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	CELA2A	P08217	269 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	FBL	P22087	321 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	CXCR2	P25025	360 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	CTNNA1	P35221	906 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	MAGEA1	P43355	309 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	EMP2	P54851	167 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	SRSF11	Q05519	484 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	RBPJ	Q06330	500 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	PRTG	Q2VWP7	1150 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	CNST	Q6PJW8	725 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	SPNS3	Q6ZMD2	512 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	RNF44	Q7L0R7	432 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	OR2L3	Q8NG85	312 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	OR13J1	Q8NGT2	312 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	HMGCLL1	Q8TB92	370 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	LKAAEAR1	Q8TD35	194 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	HDAC10	Q969S8	669 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	C10orf90	Q96M02	699 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	TTC1	Q99614	292 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	RAB11FIP5	Q9BXF6	653 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	RIC8B	Q9NVN3	520 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	PIH1D1	Q9NWS0	290 aa	Known RBP	10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	STOX2	Q9P2F5	926 aa	Predicted RBP	10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	SH3BGRL2	Q9UJC5	107 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	CDC14A	Q9UNH5	594 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	PCDHA3	Q9Y5H8	950 aa		10.83	□□□□□ -0.68
TCF4-238	ENST00000568169	DCHS2	Q6V1P9	2916 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	LOC102723996	A0A087X1L8	192 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169		A0A1W2PPV9	198 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	OR2A25	A4D2G3	310 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	OR5H15	A6NDH6	313 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	C19orf84	I3L1E1	186 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	PSMD3	O43242	534 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	SLC19A2	O60779	497 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	PRAMEF2	O60811	474 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	GOT2	P00505	430 aa	Known RBP	10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	TPM1	P09493	284 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	MYBL2	P10244	700 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	ITGAM	P11215	1152 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	CAPN3	P20807	821 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	AOAH	P28039	575 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	PSMB5	P28074	263 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	CASP6	P55212	293 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	KRTAP10-9	P60411	292 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	EEF1A2	Q05639	463 aa	Known RBP	10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	DSG2	Q14126	1118 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	CDSN	Q15517	529 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	C3AR1	Q16581	482 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	CCDC38	Q502W7	563 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	ABHD17B	Q5VST6	288 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	FBXO42	Q6P3S6	717 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	VSTM4	Q8IW00	320 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	OR2A1	Q8NGT9	310 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	SUN3	Q8TAQ9	357 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	ADAMTS18	Q8TE60	1221 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	RAD51AP1	Q96B01	352 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	MTFMT	Q96DP5	389 aa	Known RBP	10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	MVB12A	Q96EY5	273 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	C14orf79	Q96F83	325 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	IMMP1L	Q96LU5	166 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	MIPEP	Q99797	713 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	TSSK1B	Q9BXA7	367 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	ZNF700	Q9H0M5	742 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	C14orf105	Q9NVL8	296 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	TRPC4	Q9UBN4	977 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	ZNF835	Q9Y2P0	537 aa		10.82	□□□□□ -0.68
TCF4-238	ENST00000568169	IQCF5	A8MTL0	148 aa		10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	FFAR3	O14843	346 aa		10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	GPR42	O15529	346 aa		10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	CBFA2T2	O43439	604 aa		10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	TJP3	O95049	919 aa		10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	C1orf105	O95561	183 aa		10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	EIF2S1	P05198	315 aa	Known RBP	10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	ICAM2	P13598	275 aa		10.81	□□□□□ -0.68
TCF4-238	ENST00000568169	ANP32A	P39687	249 aa	Known RBP	10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms