RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 PPATQ06203 517 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 BNIP3Q12983 259 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 COL9A2Q14055 689 aaPredicted RBP5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 GANABQ14697 944 aaKnown RBP5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 CARTPTQ16568 116 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 CHRFAM7AQ494W8 412 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 MTX3Q5HYI7 312 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 ATAD3CQ5T2N8 411 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 SCARA5Q6ZMJ2 495 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 ZBTB49Q6ZSB9 765 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 SLC16A13Q7RTY0 426 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 VTCN1Q7Z7D3 282 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 MISPQ8IVT2 679 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 OR2C3Q8N628 320 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 OR10A7Q8NGE5 316 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 OR5M1Q8NGP8 315 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 TCTEX1D2Q8WW35 142 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 MRGPRX4Q96LA9 322 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 SOX7Q9BT81 388 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 C11orf84Q9BUA3 381 aaPredicted RBP5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 UCK2Q9BZX2 261 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 SEMA6AQ9H2E6 1030 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 CHD8Q9HCK8 2581 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 NMRK2Q9NPI5 230 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 MYEF2Q9P2K5 600 aaKnown RBP5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 DUX4Q9UBX2 424 aa5.8□□□□□ -1.48
TUBGCP4-207ENST00000563963 C10orf71Q711Q0 1435 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 LCHNA4D1U4 455 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 UBE2CO00762 179 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 DHX15O43143 795 aaKnown RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TRIM13O60858 407 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 SUPT7LO94864 414 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 PAPLNO95428 1278 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 CSH1P0DML2 217 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 CSH2P0DML3 217 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 DDOSTP39656 456 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 GPR143P51810 404 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 CXCR4P61073 352 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 RPS7P62081 194 aaKnown RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ZP2Q05996 745 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 MRPL49Q13405 166 aaKnown RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 IL18Q14116 193 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 DDR2Q16832 855 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 LPCAT4Q643R3 524 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ABLIM2Q6H8Q1 611 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 FRMD7Q6ZUT3 714 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TRILQ7L0X0 811 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 PIWIL4Q7Z3Z4 852 aaKnown RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 P4HA3Q7Z4N8 544 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 KLBQ86Z14 1044 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ZNF679Q8IYX0 411 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 FAM160A2Q8N612 972 aaPredicted RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 VGLL2Q8N8G2 317 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 POC5Q8NA72 575 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 FAM156AQ8NDB6 213 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TRMT10AQ8TBZ6 339 aaKnown RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 AP3S1Q92572 193 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 NUDT11Q96G61 164 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 MEGF10Q96KG7 1140 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ELF4Q99607 663 aaPredicted RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 OSMRQ99650 979 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ADAM2Q99965 735 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 RBCK1Q9BYM8 510 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 FEM1BQ9UK73 627 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TCFL5Q9UL49 500 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 CLCA2Q9UQC9 943 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 PTPN22Q9Y2R2 807 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 NCAPD2Q15021 1401 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 NPIPB8E9PQR5 432 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 C6orf229H3BNL8 230 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 CTDSP2O14595 271 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 NKRFO15226 690 aaKnown RBP eCLIP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 SUV39H1O43463 412 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 SDC3O75056 442 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ZNF780AO75290 641 aaPredicted RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 RHBDL1O75783 438 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ZBTB7AO95365 584 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 PEX11BO96011 259 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 CST3P01034 146 aaPredicted RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 A1BGP04217 495 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TRIM49P0CI25 452 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TRIM49CP0CI26 452 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 CALCBP10092 127 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 PPP3CBP16298 524 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 PTPREP23469 700 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 FPR3P25089 353 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 MSX2P35548 267 aaPredicted RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ARL3P36405 182 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 EIF2DP41214 584 aaKnown RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 KIAA1024LP59773 190 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ABCE1P61221 599 aaKnown RBP5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 NHLH2Q02577 135 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 HSF2Q03933 536 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 DNASE1L3Q13609 305 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 ALCAMQ13740 583 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 NR1I3Q14994 352 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TRAM1Q15629 374 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 TMEM139Q8IV31 216 aa5.79□□□□□ -1.48
TUBGCP4-207ENST00000563963 GCNT2Q8N0V5 402 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms