RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SLC22A9Q8IVM8 553 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 C19orf47Q8N9M1 422 aaKnown RBP18.13■□□□□ 0.49
RAB40C-207ENST00000563109 SNX31Q8N9S9 440 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 AGBL5Q8NDL9 886 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 LIN37Q96GY3 246 aaPredicted RBP18.13■□□□□ 0.49
RAB40C-207ENST00000563109 PPM1MQ96MI6 270 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 CMKLR1Q99788 373 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 CD244Q9BZW8 370 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 DNAJC11Q9NVH1 559 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 SEMA5BQ9P283 1151 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 ANKMY1Q9P2S6 941 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 OPTCQ9UBM4 332 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 EMCNQ9ULC0 261 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 PLLPQ9Y342 182 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 ADAMTS20P59510 1910 aa18.13■□□□□ 0.49
RAB40C-207ENST00000563109 CCDC187A0A096LP49 1063 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 IGHV5-51A0A0C4DH38 117 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 SLC9B1P1A6NJY1 282 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 A8MT66 165 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 STX16-NPEPL1H3BU86 382 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 STX16O14662 325 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 SASH3O75995 380 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 PVRP15151 417 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 ST6GAL1P15907 406 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 MAGP20916 626 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 HRH2P25021 359 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 LSSP48449 732 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 HSD11B2P80365 405 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 NFKB2Q00653 900 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 TARDBPQ13148 414 aaKnown RBP eCLIP18.12■□□□□ 0.49
RAB40C-207ENST00000563109 EIF3IQ13347 325 aaKnown RBP18.12■□□□□ 0.49
RAB40C-207ENST00000563109 FBXO48Q5FWF7 155 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 KIAA1614Q5VZ46 1190 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 ARHGAP22Q7Z5H3 698 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 ADCK2Q7Z695 626 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 FAM20CQ8IXL6 584 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 TCP10LQ8TDR4 215 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 KLHL6Q8WZ60 621 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 CCDC126Q96EE4 140 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 PHF21BQ96EK2 531 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 TRAPPC9Q96Q05 1148 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 KLHL25Q9H0H3 589 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 PDE7BQ9NP56 450 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 KCNK9Q9NPC2 374 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 SLC22A14Q9Y267 594 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 ANGPTL3Q9Y5C1 460 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 KCNE2Q9Y6J6 123 aa18.12■□□□□ 0.49
RAB40C-207ENST00000563109 FAM149AA5PLN7 773 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 TARM1B6A8C7 271 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 K7EPI3 171 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 DYNC1I1O14576 645 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 TYROBPO43914 113 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 SBK3P0C264 359 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 CREB1P16220 341 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 EEF1DP29692 281 aaKnown RBP18.11■□□□□ 0.49
RAB40C-207ENST00000563109 GDF5P43026 501 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 PIK3CGP48736 1102 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 AGTR2P50052 363 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 MAGOHP61326 146 aaKnown RBP18.11■□□□□ 0.49
RAB40C-207ENST00000563109 CDC16Q13042 620 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 C16orf72Q14CZ0 275 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 PDK4Q16654 411 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 ZXDCQ2QGD7 858 aaPredicted RBP18.11■□□□□ 0.49
RAB40C-207ENST00000563109 METTL2BQ6P1Q9 378 aaKnown RBP18.11■□□□□ 0.49
RAB40C-207ENST00000563109 CYB5D1Q6P9G0 228 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 ZYG11AQ6WRX3 759 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 FAM129CQ86XR2 697 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 TMEM151AQ8N4L1 468 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 ARMC2Q8NEN0 867 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 SLC5A11Q8WWX8 675 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 ZUFSPQ96AP4 578 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 ESAMQ96AP7 390 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 TLCD1Q96CP7 247 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 TCTN2Q96GX1 697 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 SLC41A2Q96JW4 573 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 FAM111AQ96PZ2 611 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 OR4K3Q96R72 315 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 SH3GL2Q99962 352 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 DPH7Q9BTV6 452 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 CAPS2Q9BXY5 557 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 SLC6A20Q9NP91 592 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 ZNF446Q9NWS9 450 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 GPRC5BQ9NZH0 403 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 SNX7Q9UNH6 387 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 BTRCQ9Y297 605 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 LOXL2Q9Y4K0 774 aa18.11■□□□□ 0.49
RAB40C-207ENST00000563109 SNRNP200O75643 2136 aaKnown RBP18.11■□□□□ 0.49
RAB40C-207ENST00000563109 AGRPO00253 132 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 CLGNO14967 610 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 TM9SF1O15321 606 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 PRPF4O43172 522 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■■■■■ 38.1
RAB40C-207ENST00000563109 HYAL3O43820 417 aaPredicted RBP18.1■□□□□ 0.49
RAB40C-207ENST00000563109 ZWINTO95229 277 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 CDH1P12830 882 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 CPA3P15088 417 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 NPPBP16860 134 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
RAB40C-207ENST00000563109 GNAZP19086 355 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 GRIA3P42263 894 aa18.1■□□□□ 0.49
RAB40C-207ENST00000563109 PCBP2Q15366 365 aaKnown RBP eCLIP18.1■□□□□ 0.498e-6■■□□□ 13.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms