RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ICE2Q659A1 982 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 RPS27LQ71UM5 84 aaKnown RBP14.72□□□□□ -0.05
NEDD1-213ENST00000557644 GOLGA6L1Q8N7Z2 621 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 SLC6A20Q9NP91 592 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 CUEDC1Q9NWM3 386 aaPredicted RBP14.72□□□□□ -0.05
NEDD1-213ENST00000557644 CSO75390 466 aaKnown RBP14.71□□□□□ -0.05
NEDD1-213ENST00000557644 INHBCP55103 352 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 PRDX1Q06830 199 aaKnown RBP14.71□□□□□ -0.05
NEDD1-213ENST00000557644 SLC5A12Q1EHB4 618 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 ARHGAP22Q7Z5H3 698 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 CD180Q99467 661 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 DPYSL5Q9BPU6 564 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 CNOT10Q9H9A5 744 aaKnown RBP14.71□□□□□ -0.05
NEDD1-213ENST00000557644 SSU72Q9NP77 194 aaKnown RBP14.71□□□□□ -0.05
NEDD1-213ENST00000557644 C1GALT1Q9NS00 363 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 A0A0J9YY10 115 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 MYL2P10916 166 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 TAC1P20366 129 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 CCND1P24385 295 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 ATP5F1P24539 256 aaPredicted RBP14.71□□□□□ -0.05
NEDD1-213ENST00000557644 EEF1DP29692 281 aaKnown RBP14.71□□□□□ -0.05
NEDD1-213ENST00000557644 KCNAB1Q14722 419 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 C16orf72Q14CZ0 275 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 ZYG11AQ6WRX3 759 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 DCBLD1Q8N8Z6 715 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 UBTD2Q8WUN7 234 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 NEIL2Q969S2 332 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 TRAPPC9Q96Q05 1148 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 MECRQ9BV79 373 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 MLXIPLQ9NP71 852 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 MRPS30Q9NP92 439 aaKnown RBP14.71□□□□□ -0.05
NEDD1-213ENST00000557644 COPG2Q9UBF2 871 aa14.71□□□□□ -0.05
NEDD1-213ENST00000557644 TMEM120BA0PK00 339 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 PRPF4O43172 522 aaKnown RBP eCLIP14.7□□□□□ -0.06
NEDD1-213ENST00000557644 IPO13O94829 963 aaKnown RBP14.7□□□□□ -0.06
NEDD1-213ENST00000557644 JUPP14923 745 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 CPA3P15088 417 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 GRIA3P42263 894 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 ETV4P43268 484 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 TARDBPQ13148 414 aaKnown RBP eCLIP14.7□□□□□ -0.061e-7■■■■□ 24.6
NEDD1-213ENST00000557644 LCTLQ6UWM7 567 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 PRSS42Q7Z5A4 293 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 KLHDC8AQ8IYD2 350 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 TMEM74Q96NL1 305 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 NSUN5Q96P11 429 aaKnown RBP14.7□□□□□ -0.06
NEDD1-213ENST00000557644 TMEM237Q96Q45 408 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 DPH7Q9BTV6 452 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 SEMA5BQ9P283 1151 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 PCM1Q15154 2024 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 H7BY64 318 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 E2F3O00716 465 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 CDH1P12830 882 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 EPORP19235 508 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 CMPK1P30085 196 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 CCKBRP32239 447 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 HPDP32754 393 aaPredicted RBP14.7□□□□□ -0.06
NEDD1-213ENST00000557644 NFKB2Q00653 900 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 PCLAFQ15004 111 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 CATSPEREQ5SY80 951 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 FCRL6Q6DN72 434 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 RAB44Q7Z6P3 723 aaPredicted RBP14.7□□□□□ -0.06
NEDD1-213ENST00000557644 C10orf107Q8IVU9 208 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 ANKRD42Q8N9B4 389 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 PRAP1Q96NZ9 151 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 DEPDC7Q96QD5 511 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 PCBD2Q9H0N5 130 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 ACBD3Q9H3P7 528 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 ZNF768Q9H5H4 540 aaKnown RBP14.7□□□□□ -0.06
NEDD1-213ENST00000557644 FAM60AQ9NP50 221 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 DNAJC11Q9NVH1 559 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 OPTCQ9UBM4 332 aa14.7□□□□□ -0.06
NEDD1-213ENST00000557644 PMS2P1A4D2B8 440 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 E7EQ34 232 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 STX16-NPEPL1H3BU86 382 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 K7EPI3 171 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 STX16O14662 325 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 HYAL3O43820 417 aaPredicted RBP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 PRKAA2P54646 552 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 SH3BP2P78314 561 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 PCBP2Q15366 365 aaKnown RBP eCLIP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 FIGLAQ6QHK4 219 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 LRRC70Q7Z2Q7 622 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 C17orf64Q86WR6 236 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 TMPRSS12Q86WS5 348 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 TEX9Q8N6V9 391 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 C19orf47Q8N9M1 422 aaKnown RBP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 SNX31Q8N9S9 440 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 KLHL6Q8WZ60 621 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 HAUS8Q9BT25 410 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 SOHLH2Q9NX45 425 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 KCNE2Q9Y6J6 123 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 A0A1W2PNU3 283 aaPredicted RBP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 TOX3O15405 576 aaPredicted RBP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 HCRTR1O43613 425 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 PRAMEF4O60810 478 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 ZBTB11O95625 1053 aaPredicted RBP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 ANKRD34CP0C6C1 535 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 HERVK_113P63132 956 aa14.69□□□□□ -0.06
NEDD1-213ENST00000557644 MEF2AQ02078 507 aaPredicted RBP14.69□□□□□ -0.06
NEDD1-213ENST00000557644 CDC16Q13042 620 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms