RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SOD1P00441 154 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 GOT2P00505 430 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 MYBL2P10244 700 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 RALBP11234 206 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 OGNP20774 298 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 MAKP20794 623 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 HTR1BP28222 390 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CD38P28907 300 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 FOXN2P32314 431 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 NBL1P41271 181 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 PTGER3P43115 390 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 GPR1P46091 355 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 THOP1P52888 689 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 PTTG1IPP53801 180 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 INHBCP55103 352 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 SCAND1P57086 179 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 GPX6P59796 221 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CDK3Q00526 305 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 TCF15Q12870 199 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 THOC5Q13769 683 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 PTK2BQ14289 1009 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ITIH4Q14624 930 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 PTPRCAPQ14761 206 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 NFATC4Q14934 902 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 KYNUQ16719 465 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 TYSND1Q2T9J0 566 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 FAM153CQ494X1 144 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ATP13A5Q4VNC0 1218 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 FASTKD1Q53R41 847 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ZRANB3Q5FWF4 1079 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ALS2CLQ60I27 953 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 LAIR1Q6GTX8 287 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 RAET1GQ6H3X3 334 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 MACC1Q6ZN28 852 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 GCNT7Q6ZNI0 430 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 RFLNAQ6ZTI6 216 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 DOK3Q7L591 496 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 KCNMB4Q86W47 210 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 HEATR4Q86WZ0 1026 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 RBFAQ8N0V3 343 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 TSPEARQ8WU66 669 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 SNX19Q92543 992 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CDKL2Q92772 493 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CFAP36Q96G28 342 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 DCUN1D1Q96GG9 259 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 PKNOX2Q96KN3 472 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 BMFQ96LC9 184 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 C9orf72Q96LT7 481 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CYTH2Q99418 400 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 COPS8Q99627 209 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 QRSL1Q9H0R6 528 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CDC42EP4Q9H3Q1 356 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ASB8Q9H765 288 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 SUDS3Q9H7L9 328 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ERVMER34-1Q9H9K5 563 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 EBF2Q9HAK2 575 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 TM9SF3Q9HD45 589 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 MBNL1Q9NR56 388 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 AASDHPPTQ9NRN7 309 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 NINJ2Q9NZG7 142 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 EIF2B4Q9UI10 523 aaKnown RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CD84Q9UIB8 345 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 PILRBQ9UKJ0 227 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 CORO1CQ9ULV4 474 aaPredicted RBP5.64□□□□□ -1.51
SCAF11-213ENST00000550629 SLC17A4Q9Y2C5 497 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 COMMD10Q9Y6G5 202 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF318Q5VUA4 2279 aa5.64□□□□□ -1.51
SCAF11-213ENST00000550629 PLXNA2O75051 1894 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF106Q9H2Y7 1883 aaKnown RBP5.63□□□□□ -1.51
SCAF11-213ENST00000550629 SPTY2D1-AS1A0A0U1RR47 76 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 A0A1W2PR77 199 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 CCDC78A2IDD5 438 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 POM121BA6NF01 834 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 H3BMM5 538 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 TLR4O00206 839 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 CCL22O00626 93 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 CHUKO15111 745 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 RIPK2O43353 540 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 KCNJ13O60928 360 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 LRP3O75074 770 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 NDUFS3O75489 264 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 BANF1O75531 89 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 TCEA3O75764 348 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 EPN2O95208 641 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 SLC25A14O95258 325 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-213ENST00000550629 PCCBP05166 539 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 IVLP07476 585 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 RETP07949 1114 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 ADH4P08319 380 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 ERVK-10P10266 1014 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 CPEP16870 476 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 ZNF7P17097 686 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-213ENST00000550629 MSH3P20585 1137 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 RPS3P23396 243 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCAF11-213ENST00000550629 SSTR1P30872 391 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 NSG1P42857 185 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 LEPRP48357 1165 aaKnown RBP5.63□□□□□ -1.51
SCAF11-213ENST00000550629 DHPSP49366 369 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-213ENST00000550629 NXPH1P58417 271 aa5.63□□□□□ -1.51
SCAF11-213ENST00000550629 SRSF5Q13243 272 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms