RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ARMC2Q8NEN0 867 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 UBTD2Q8WUN7 234 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 PRR11Q96HE9 360 aaPredicted RBP15.68■□□□□ 0.1
LIMS2-217ENST00000545738 TSNARE1Q96NA8 513 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 NSUN5Q96P11 429 aaKnown RBP15.68■□□□□ 0.1
LIMS2-217ENST00000545738 TRAPPC9Q96Q05 1148 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 MECRQ9BV79 373 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 SENP1Q9P0U3 644 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 GRID1Q9ULK0 1009 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 WASF3Q9UPY6 502 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 CLCA2Q9UQC9 943 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 CFAP47Q6ZTR5 3102 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 A0A1B0GTL3 188 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 CCDC189A1A4V9 331 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 CSO75390 466 aaKnown RBP15.68■□□□□ 0.1
LIMS2-217ENST00000545738 RASSF9O75901 435 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 WDR47O94967 919 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 CTSBP07858 339 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 GRIA3P42263 894 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 ALDH18A1P54886 795 aaKnown RBP15.68■□□□□ 0.1
LIMS2-217ENST00000545738 SH3BP2P78314 561 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 SF1Q15637 639 aaKnown RBP15.68■□□□□ 0.1
LIMS2-217ENST00000545738 PHF19Q5T6S3 580 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 CACHD1Q5VU97 1274 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 ARMC6Q6NXE6 501 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 PRSS42Q7Z5A4 293 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 RAB42Q8N4Z0 105 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 ATL1Q8WXF7 558 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 NEIL2Q969S2 332 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 ZDHHC12Q96GR4 267 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 FCRL4Q96PJ5 515 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 TMEM237Q96Q45 408 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 CD244Q9BZW8 370 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 SPNS1Q9H2V7 528 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 PCDHB11Q9Y5F2 797 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 ACTL7BQ9Y614 415 aa15.68■□□□□ 0.1
LIMS2-217ENST00000545738 A0A0J9YY10 115 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 MATN2O00339 956 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 E2F3O00716 465 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 PPP6CO00743 305 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 ZW10O43264 779 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 HGFP14210 728 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 SPINK2P20155 84 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 CDH3P22223 829 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 CCKBRP32239 447 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 INHBCP55103 352 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 NFKB2Q00653 900 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 PRDX1Q06830 199 aaKnown RBP15.67■□□□□ 0.1
LIMS2-217ENST00000545738 TARDBPQ13148 414 aaKnown RBP eCLIP15.67■□□□□ 0.1
LIMS2-217ENST00000545738 SLC5A12Q1EHB4 618 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 CATSPEREQ5SY80 951 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 AGBL2Q5U5Z8 902 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 CAPN13Q6MZZ7 669 aaPredicted RBP15.67■□□□□ 0.1
LIMS2-217ENST00000545738 ZYG11AQ6WRX3 759 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 WDR48Q8TAF3 677 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 KLHL6Q8WZ60 621 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 PMEPA1Q969W9 287 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 ATP6V1G3Q96LB4 118 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 ZNF768Q9H5H4 540 aaKnown RBP15.67■□□□□ 0.1
LIMS2-217ENST00000545738 ZBTB26Q9HCK0 441 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 MLXIPLQ9NP71 852 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 SSU72Q9NP77 194 aaKnown RBP15.67■□□□□ 0.1
LIMS2-217ENST00000545738 C1GALT1Q9NS00 363 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 COPG2Q9UBF2 871 aa15.67■□□□□ 0.1
LIMS2-217ENST00000545738 PABPN1LA6NDY0 278 aaKnown RBP15.66■□□□□ 0.1
LIMS2-217ENST00000545738 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 E7EQ34 232 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 CCNT2O60583 730 aaKnown RBP15.66■□□□□ 0.1
LIMS2-217ENST00000545738 CTSVO60911 334 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 STK16O75716 305 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 ANKRD34CP0C6C1 535 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 EEF1DP29692 281 aaKnown RBP15.66■□□□□ 0.1
LIMS2-217ENST00000545738 CLPPQ16740 277 aaPredicted RBP15.66■□□□□ 0.1
LIMS2-217ENST00000545738 CCDC153Q494R4 210 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 THEMIS2Q5TEJ8 643 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 CES4AQ5XG92 561 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 ZNF425Q6IV72 752 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 LCTLQ6UWM7 567 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 ATG14Q6ZNE5 492 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 TMPRSS7Q7RTY8 843 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 SLC41A2Q96JW4 573 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 DPH7Q9BTV6 452 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 OCIAD1Q9NX40 245 aa15.66■□□□□ 0.1
LIMS2-217ENST00000545738 SIDT1Q9NXL6 827 aaKnown RBP15.66■□□□□ 0.1
LIMS2-217ENST00000545738 ZNF839A8K0R7 811 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 H7BY64 318 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 PRPF4O43172 522 aaKnown RBP eCLIP15.65■□□□□ 0.1
LIMS2-217ENST00000545738 IPO13O94829 963 aaKnown RBP15.65■□□□□ 0.1
LIMS2-217ENST00000545738 RPS17P08708 135 aaKnown RBP15.65■□□□□ 0.1
LIMS2-217ENST00000545738 CDH1P12830 882 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 CCL4P13236 92 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 CD22P20273 847 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 ATP5F1P24539 256 aaPredicted RBP15.65■□□□□ 0.1
LIMS2-217ENST00000545738 CCR10P46092 362 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 GABRA4P48169 554 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 MEF2AQ02078 507 aaPredicted RBP15.65■□□□□ 0.1
LIMS2-217ENST00000545738 PCBP2Q15366 365 aaKnown RBP eCLIP15.65■□□□□ 0.14e-6■■■■□ 25.7
LIMS2-217ENST00000545738 DEFB110Q30KQ9 67 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 PLD3Q8IV08 490 aa15.65■□□□□ 0.1
LIMS2-217ENST00000545738 C10orf107Q8IVU9 208 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms