RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 PSMB4P28070 264 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 CSKP41240 450 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 TP53BP2Q13625 1128 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 PTPRRQ15256 657 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 CDO1Q16878 200 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 FAM83EQ2M2I3 478 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 MPP7Q5T2T1 576 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 PDZK1Q5T2W1 519 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 PLET1Q6UQ28 207 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 OVCH2Q7RTZ1 564 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 MRPL10Q7Z7H8 261 aaKnown RBP11.74□□□□□ -0.53
SPIDR-217ENST00000522117 RNF130Q86XS8 419 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 KRT73Q86Y46 540 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 RBFAQ8N0V3 343 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 OR4D10Q8NGI6 311 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 FBXO30Q8TB52 745 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 APH1BQ8WW43 257 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 DNASE1L2Q92874 299 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 RHBDF1Q96CC6 855 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 CELF6Q96J87 481 aaKnown RBP11.74□□□□□ -0.53
SPIDR-217ENST00000522117 WDFY2Q96P53 400 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 QRFPRQ96P65 431 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 LRRC3Q9BY71 257 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 RHOJQ9H4E5 214 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 BRD9Q9H8M2 597 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 ZFP64Q9NPA5 681 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 UBQLN2Q9UHD9 624 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 ERVW-1Q9UQF0 538 aa11.74□□□□□ -0.53
SPIDR-217ENST00000522117 MFSD2BA6NFX1 497 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ABCD4O14678 606 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 TNNC2P02585 160 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ZNF37AP17032 561 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 GPD1P21695 349 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 IGFBP5P24593 272 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SLC19A1P41440 591 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 PCP4P48539 62 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 POU3F4P49335 361 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 RGS6P49758 472 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 DSC1Q08554 894 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 FGFBP1Q14512 234 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ETFDHQ16134 617 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 JADE1Q6IE81 842 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 HHIPL2Q6UWX4 724 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 USP7Q93009 1102 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SENP8Q96LD8 212 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 CYP2S1Q96SQ9 504 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 BARD1Q99728 777 aaKnown RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 GAL3ST1Q99999 423 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SLC19A3Q9BZV2 496 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 MIOSQ9NXC5 875 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 TSR3Q9UJK0 312 aaKnown RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 NDRG4Q9ULP0 352 aaKnown RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 A6NJY4 79 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 DNASE2O00115 360 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 PLOD3O60568 738 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 CFDP00746 253 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 CFBP00751 764 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 CST3P01034 146 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 IFNA7P01567 189 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 FAM157BP0CG42 384 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 KCNQ1P51787 676 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 CSNK2BP67870 215 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SPP2Q13103 211 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 RPA4Q13156 261 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 VEPH1Q14D04 833 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 GTDC1Q4AE62 458 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 PAN2Q504Q3 1202 aaKnown RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 GHDCQ8N2G8 530 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 OR11H4Q8NGC9 324 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 COPS4Q9BT78 406 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 RASSF1Q9NS23 344 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 CENPFP49454 3210 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 RAB19A4D1S5 217 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 C2CD4BA6NLJ0 364 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 VPS26AO75436 327 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 RASGRP1O95267 797 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 YWHABP31946 246 aaKnown RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 PLK1P53350 603 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SOX10P56693 466 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 RAB10P61026 200 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 PSPHP78330 225 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 DMP1Q13316 513 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 RTP2Q5QGT7 225 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 KIAA0319Q5VV43 1072 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ALG1LQ6GMV1 187 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SCYL2Q6P3W7 929 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ANGPTL8Q6UXH0 198 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SLC26A9Q7LBE3 791 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ABI3BPQ7Z7G0 1075 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SCUBE3Q8IX30 993 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ZNF675Q8TD23 568 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ADPGKQ9BRR6 497 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ZNF670Q9BS34 389 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SNRNP25Q9BV90 132 aaKnown RBP11.73□□□□□ -0.53
SPIDR-217ENST00000522117 ACTR8Q9H981 624 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SETD4Q9NVD3 440 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 SDHAF2Q9NX18 166 aa11.73□□□□□ -0.53
SPIDR-217ENST00000522117 VNN3Q9NY84 501 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms