RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 HSH2DQ96JZ2 352 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 KLF16Q9BXK1 252 aaPredicted RBP12.52□□□□□ -0.41
SMG7-214ENST00000508461 BRINP2Q9C0B6 783 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 ZNF334Q9HCZ1 680 aaPredicted RBP12.52□□□□□ -0.41
SMG7-214ENST00000508461 DNAAF2Q9NVR5 837 aaKnown RBP12.52□□□□□ -0.41
SMG7-214ENST00000508461 CFAP20Q9Y6A4 193 aaKnown RBP12.52□□□□□ -0.41
SMG7-214ENST00000508461 OTOFQ9HC10 1997 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 RGS10O43665 173 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 C8GP07360 202 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 ALOX12P18054 663 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 CR2P20023 1033 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 CCR7P32248 378 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 FNDC3BQ53EP0 1204 aaKnown RBP12.52□□□□□ -0.41
SMG7-214ENST00000508461 CARD16Q5EG05 197 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 TPT1P8Q9HAU6 139 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 TUBA8Q9NY65 449 aaPredicted RBP12.52□□□□□ -0.41
SMG7-214ENST00000508461 PRKAG2Q9UGJ0 569 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 PSME2Q9UL46 239 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 COQ6Q9Y2Z9 468 aa12.52□□□□□ -0.41
SMG7-214ENST00000508461 ZFC3H1O60293 1989 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 PNMA8CA0A1B0GUJ8 204 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 PCDH8O95206 1070 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 IGLV3-27P01718 113 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 PABPC1P11940 636 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 EIF4EBP2Q13542 120 aaPredicted RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 RAPSNQ13702 412 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 UAP1L1Q3KQV9 507 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 P2RY8Q86VZ1 359 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 TMEM25Q86YD3 366 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 KREMEN2Q8NCW0 462 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 ERVK-18Q9QC07 812 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 AP3M1Q9Y2T2 418 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 CNTRLQ7Z7A1 2325 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 ZNF99A8MXY4 864 aaPredicted RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 LEFTY2O00292 366 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 TAPBPO15533 448 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 NPPAP01160 153 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 CHRM5P08912 532 aaPredicted RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 MATN1P21941 496 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 DCTP40126 519 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 TP53BP2Q13625 1128 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 SKIV2LQ15477 1246 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 MED22Q15528 200 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 TRIM71Q2Q1W2 868 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 XKR7Q5GH72 579 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 IER5LQ5T953 404 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 THOC6Q86W42 341 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 SNX29P2Q8IUI4 249 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 VANGL1Q8TAA9 524 aaPredicted RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 HTRA1Q92743 480 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 TSEN34Q9BSV6 310 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 OR51B5Q9H339 312 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 HEBP1Q9NRV9 189 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 MIA3Q5JRA6 1907 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 TNFRSF11BO00300 401 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 TSPAN6O43657 245 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 CNOT3O75175 753 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 HMGA1P17096 107 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 CDH3P22223 829 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 JAK1P23458 1154 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 PIGAP37287 484 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 ABHD18Q0P651 414 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 NFATC3Q12968 1075 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 GDPD4Q6W3E5 623 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 RRM2BQ7LG56 351 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 PHF10Q8WUB8 498 aaKnown RBP12.51□□□□□ -0.41
SMG7-214ENST00000508461 ATL1Q8WXF7 558 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 PPCDCQ96CD2 204 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 VPS35Q96QK1 796 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
SMG7-214ENST00000508461 KPNA4O00629 521 aaPredicted RBP12.5□□□□□ -0.41
SMG7-214ENST00000508461 ATG13O75143 517 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 UGT2B11O75310 529 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 STATHP02808 62 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 ADH1AP07327 375 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 PRPS1L1P21108 318 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 CDKN2CP42773 168 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 TRIM60Q495X7 471 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 AGTRAPQ6RW13 159 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 DLEU7Q6UYE1 221 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 CCDC103Q8IW40 242 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 FUNDC2Q9BWH2 189 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 SLC2A11Q9BYW1 496 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 OR2AG1Q9H205 316 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 CTPS2Q9NRF8 586 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 TMCC3Q9ULS5 477 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 GSTM1P09488 218 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 SRCP12931 536 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 PFKLP17858 780 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 RRM2P31350 389 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 ATP6V1E1P36543 226 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 CTSKP43235 329 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 CCDC85BQ15834 202 aaPredicted RBP12.5□□□□□ -0.41
SMG7-214ENST00000508461 INAQ16352 499 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 LY6G5CQ5SRR4 150 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 TMEM236Q5W0B7 351 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 DRAXINQ8NBI3 349 aaPredicted RBP12.5□□□□□ -0.41
SMG7-214ENST00000508461 NCSTNQ92542 709 aa12.5□□□□□ -0.41
SMG7-214ENST00000508461 COX4I2Q96KJ9 171 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms