RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SLC16A9Q7RTY1 509 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 SPATA19Q7Z5L4 167 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 ANKRD23Q86SG2 305 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 DEPDC1BQ8WUY9 529 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 PHLDA1Q8WV24 401 aaPredicted RBP4.03□□□□□ -1.76
SMC4-224ENST00000494612 HEXDCQ8WVB3 486 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 BSCL2Q96G97 398 aaPredicted RBP4.03□□□□□ -1.76
SMC4-224ENST00000494612 HES6Q96HZ4 224 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 JAKMIP1Q96N16 626 aaKnown RBP4.03□□□□□ -1.76
SMC4-224ENST00000494612 UHRF2Q96PU4 802 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 FNBP1Q96RU3 617 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 DESI2Q9BSY9 194 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 ZWILCHQ9H900 591 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 SLC52A3Q9NQ40 469 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 INTS9Q9NV88 658 aaKnown RBP4.03□□□□□ -1.76
SMC4-224ENST00000494612 P4HTMQ9NXG6 502 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 GTF3C4Q9UKN8 822 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 STUB1Q9UNE7 303 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 SNX7Q9UNH6 387 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 SCN5AQ14524 2016 aa4.03□□□□□ -1.76
SMC4-224ENST00000494612 SLU7O95391 586 aaKnown RBP4.02□□□□□ -1.77
SMC4-224ENST00000494612 STAG3L1P0CL83 205 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 PAX1P15863 534 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 EFNA1P20827 205 aaPredicted RBP4.02□□□□□ -1.77
SMC4-224ENST00000494612 HOXC8P31273 242 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 TNNT3P45378 269 aaPredicted RBP4.02□□□□□ -1.77
SMC4-224ENST00000494612 KCNJ1P48048 391 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 PTENP60484 403 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 RBP5P82980 135 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 CDR2Q01850 454 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 POU5F1Q01860 360 aaKnown RBP4.02□□□□□ -1.77
SMC4-224ENST00000494612 SP3Q02447 781 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 RASGEF1BQ0VAM2 473 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 SCARB2Q14108 478 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 HERC3Q15034 1050 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 SLC25A53Q5H9E4 307 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 CCNYL2Q5T2Q4 361 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 FAM91A1Q658Y4 838 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 TMEM182Q6ZP80 229 aaPredicted RBP4.02□□□□□ -1.77
SMC4-224ENST00000494612 ABI3BPQ7Z7G0 1075 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 ZNF524Q96C55 264 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 CCDC114Q96M63 670 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 LRRC3BQ96PB8 259 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 EGFL8Q99944 293 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 KRTAP4-3Q9BYR4 195 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 TLE6Q9H808 572 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 SIX2Q9NPC8 291 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 FAM207AQ9NSI2 230 aaPredicted RBP4.02□□□□□ -1.77
SMC4-224ENST00000494612 INTS10Q9NVR2 710 aaKnown RBP4.02□□□□□ -1.77
SMC4-224ENST00000494612 DNAJB9Q9UBS3 223 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 KCNJ14Q9UNX9 436 aa4.02□□□□□ -1.77
SMC4-224ENST00000494612 WRNQ14191 1432 aaPredicted RBP eCLIP4.02□□□□□ -1.77
SMC4-224ENST00000494612 KIAA1210Q9ULL0 1709 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 STK36Q9NRP7 1315 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 CASTOR2A6NHX0 329 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 PMS2P5A8MQ11 134 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 CCL24O00175 119 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 ARPC2O15144 300 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 ATP6V0E1O15342 81 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 TRMUO75648 421 aaKnown RBP4.01□□□□□ -1.77
SMC4-224ENST00000494612 ATP6AP2O75787 350 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 TGDSO95455 350 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 SP1P08047 785 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 PSMB4P28070 264 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 CSTF2P33240 577 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMC4-224ENST00000494612 HSD17B3P37058 310 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 WNT5AP41221 380 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 BFSP1Q12934 665 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 TAF13Q15543 124 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 NPTX1Q15818 432 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 GTDC1Q4AE62 458 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 FFAR4Q5NUL3 377 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 MOXD1Q6UVY6 613 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 NUDT13Q86X67 352 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 DCUN1D3Q8IWE4 304 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 KLHL7Q8IXQ5 586 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 MAML2Q8IZL2 1156 aaPredicted RBP4.01□□□□□ -1.77
SMC4-224ENST00000494612 APCDD1Q8J025 514 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 KLHDC1Q8N7A1 406 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 OR10Q1Q8NGQ4 319 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 OR4C3Q8NH37 302 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 OR2B2Q9GZK3 357 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 SHARPINQ9H0F6 387 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 Q9H8V8 135 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 FGF21Q9NSA1 209 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 ADPRHL2Q9NX46 363 aa4.01□□□□□ -1.77
SMC4-224ENST00000494612 ERICH3Q5RHP9 1530 aa4□□□□□ -1.77
SMC4-224ENST00000494612 HTR3EA5X5Y0 456 aa4□□□□□ -1.77
SMC4-224ENST00000494612 C2orf81A6NN90 581 aa4□□□□□ -1.77
SMC4-224ENST00000494612 FPGTO14772 594 aa4□□□□□ -1.77
SMC4-224ENST00000494612 WDR46O15213 610 aaKnown RBP4□□□□□ -1.77
SMC4-224ENST00000494612 SNX3O60493 162 aa4□□□□□ -1.77
SMC4-224ENST00000494612 PRAF2O60831 178 aa4□□□□□ -1.77
SMC4-224ENST00000494612 SERPING1P05155 500 aa4□□□□□ -1.77
SMC4-224ENST00000494612 ZFYP08048 801 aaPredicted RBP4□□□□□ -1.77
SMC4-224ENST00000494612 MYL6BP14649 208 aa4□□□□□ -1.77
SMC4-224ENST00000494612 EPCAMP16422 314 aa4□□□□□ -1.77
SMC4-224ENST00000494612 LHCGRP22888 699 aa4□□□□□ -1.77
SMC4-224ENST00000494612 TIMP3P35625 211 aa4□□□□□ -1.77
SMC4-224ENST00000494612 DLK1P80370 383 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms