RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 CBWD6Q4V339 395 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 CBWD3Q5JTY5 395 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 CES4AQ5XG92 561 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 PRR27Q6MZM9 219 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 GDPGP1Q6ZNW5 385 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 C4orf50Q6ZRC1 276 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 ARHGAP22Q7Z5H3 698 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 ZFAND4Q86XD8 727 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 TDRD5Q8NAT2 981 aaKnown RBP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 SLC37A3Q8NCC5 494 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 SYN2Q92777 582 aaPredicted RBP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 SLC22A18Q96BI1 424 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 ZNF414Q96IQ9 312 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 HOXD1Q9GZZ0 328 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 ZHX3Q9H4I2 956 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 TLE6Q9H808 572 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 GIMAP4Q9NUV9 329 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 GDE1Q9NZC3 331 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 STK26Q9P289 416 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 CRNNQ9UBG3 495 aaPredicted RBP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 CTSZQ9UBR2 303 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 FBXO2Q9UK22 296 aaPredicted RBP3.03□□□□□ -1.92
HMGN1-218ENST00000490032 TMED3Q9Y3Q3 217 aa3.03□□□□□ -1.92
HMGN1-218ENST00000490032 IGLV3-10A0A075B6K4 115 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 A0A087WUV0 522 aaPredicted RBP3.02□□□□□ -1.93
HMGN1-218ENST00000490032 ENTPD3O75355 529 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 TSPAN9O75954 239 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 THEGLP0DJG4 465 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 RPL35AP18077 110 aaKnown RBP3.02□□□□□ -1.93
HMGN1-218ENST00000490032 IL4RP24394 825 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 DNASE1P24855 282 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 PIK3R1P27986 724 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 PTGER4P35408 488 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 IRX4P78413 519 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 CDH18Q13634 790 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 ITGA7Q13683 1181 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 NTRK2Q16620 822 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 PHKG1Q16816 387 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 KRTAP13-3Q3SY46 172 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 HIGD2BQ4VC39 106 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 NUP54Q7Z3B4 507 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 MARCH9Q86YJ5 346 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 ABHD12Q8N2K0 398 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 METTL4Q8N3J2 472 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 FAM218AQ96MZ4 157 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 LGMNQ99538 433 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 SEPHS2Q99611 448 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 PANK2Q9BZ23 570 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 PUS3Q9BZE2 481 aaKnown RBP3.02□□□□□ -1.93
HMGN1-218ENST00000490032 B3GAT2Q9NPZ5 323 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 GON4LQ3T8J9 2241 aa3.02□□□□□ -1.93
HMGN1-218ENST00000490032 ARID4BQ4LE39 1312 aaPredicted RBP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 TRBV5-5A0A0J9YX44 114 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 SNURFLB1AK76 121 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 FPGTO14772 594 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 TFECO14948 347 aaPredicted RBP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 GJB3O75712 270 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 FOLR2P14207 255 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 SAT1P21673 171 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 MTHFRP42898 656 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 LBX1P52954 281 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 PSMC6P62333 389 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 MYL7Q01449 175 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 HSPB3Q12988 150 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 CHAF1BQ13112 559 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 C15orf32Q32M92 178 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 MFSD12Q6NUT3 480 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 HPS6Q86YV9 775 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 LINC00346Q8IVM7 164 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 LGI2Q8N0V4 545 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 OR5T2Q8NGG2 359 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 PRPF31Q8WWY3 499 aaKnown RBP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 ATL1Q8WXF7 558 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 SKA1Q96BD8 255 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 THOC1Q96FV9 657 aaKnown RBP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 ATXN7L3BQ96GX2 97 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 PDLIM5Q96HC4 596 aaKnown RBP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 PARLQ9H300 379 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 Q9H8V8 135 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 MYNNQ9NPC7 610 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 PRMT7Q9NVM4 692 aaPredicted RBP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 HAUS2Q9NVX0 235 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 GPR83Q9NYM4 423 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 ZNF510Q9Y2H8 683 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 R4GN57 208 aa3.01□□□□□ -1.93
HMGN1-218ENST00000490032 RSF1Q96T23 1441 aaPredicted RBP3.01□□□□□ -1.93
HMGN1-218ENST00000490032 NISCHQ9Y2I1 1504 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 FSD2A1L4K1 749 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 GLOD5A6NK44 160 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 IPO8O15397 1037 aaKnown RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 HOXD4P09016 255 aaPredicted RBP3□□□□□ -1.93
HMGN1-218ENST00000490032 RAB40ALP0C0E4 278 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 LINGO3P0C6S8 592 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 PFKFB1P16118 471 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 SOX3P41225 446 aa3□□□□□ -1.93
HMGN1-218ENST00000490032 MATR3P43243 847 aaKnown RBP eCLIP3□□□□□ -1.93
HMGN1-218ENST00000490032 VAMP7P51809 220 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms