RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 SPATA17Q96L03 361 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 EXOSC4Q9NPD3 245 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TRPV5Q9NQA5 729 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 GIMAP4Q9NUV9 329 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 BTBD3Q9Y2F9 522 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 FGF1P05230 155 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 SERPINF2P08697 491 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 OGNP20774 298 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 CD52P31358 61 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 GRK4P32298 578 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 CA5AP35218 305 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 SLC15A1P46059 708 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 ACVR1Q04771 509 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 MED22Q15528 200 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 UPP1Q16831 310 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TYSND1Q2T9J0 566 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TRIM60Q495X7 471 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 ARMCX4Q5H9R4 360 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 NEK5Q6P3R8 708 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TRIM48Q8IWZ4 208 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TMEM86AQ8N2M4 240 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 PDLIM5Q96HC4 596 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TRNT1Q96Q11 434 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 SDHCQ99643 169 aaPredicted RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TSEN34Q9BSV6 310 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 KATNAL1Q9BW62 490 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 OR2B2Q9GZK3 357 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 IRF2BPLQ9H1B7 796 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TIGARQ9NQ88 270 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TMEM184CQ9NVA4 438 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 ELOVL2Q9NXB9 296 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 THUMPD1Q9NXG2 353 aaKnown RBP13.81□□□□□ -0.2
COL16A1-214ENST00000488128 TAS2R9Q9NYW1 312 aa13.81□□□□□ -0.2
COL16A1-214ENST00000488128 SMIM30A4D0T7 59 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 FAM172BPA6NC97 362 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 H3BM21 787 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 ULK1O75385 1050 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 RETP07949 1114 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 CHRM5P08912 532 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-214ENST00000488128 BCKDHAP12694 445 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 TBX4P57082 545 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 DEFA1P59665 94 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 DEFA3P59666 94 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 TSPYL5Q86VY4 417 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-214ENST00000488128 KIAA1958Q8N8K9 716 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 VANGL1Q8TAA9 524 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF675Q8TD23 568 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 BCL7BQ9BQE9 202 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 POPDC3Q9HBV1 291 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 RANGRFQ9HD47 186 aaPredicted RBP13.8□□□□□ -0.2
COL16A1-214ENST00000488128 AASDHPPTQ9NRN7 309 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 MUTYHQ9UIF7 546 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 MOSPD1Q9UJG1 213 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 LOC730098B7Z3J9 87 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 GFRA2O00451 464 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 FFAR2O15552 330 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 SEMA3DO95025 777 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 CSF2P04141 144 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 CD83Q01151 205 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 CACHD1Q5VU97 1274 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 OR4F3Q6IEY1 312 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF598Q86UK7 904 aaKnown RBP13.8□□□□□ -0.2
COL16A1-214ENST00000488128 TSPAN18Q96SJ8 248 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 LRTM1Q9HBL6 345 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 AFF4Q9UHB7 1163 aaKnown RBP13.8□□□□□ -0.2
COL16A1-214ENST00000488128 CCL27Q9Y4X3 112 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 PCDHGA6Q9Y5G7 932 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 TRPV2Q9Y5S1 764 aa13.8□□□□□ -0.2
COL16A1-214ENST00000488128 GOLGA4Q13439 2230 aaKnown RBP13.79□□□□□ -0.2
COL16A1-214ENST00000488128 H3BQ06 376 aaPredicted RBP13.79□□□□□ -0.2
COL16A1-214ENST00000488128 MEN1O00255 615 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 KLK8O60259 260 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 KIAA0513O60268 411 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 RPLP0P05388 317 aaKnown RBP13.79□□□□□ -0.2
COL16A1-214ENST00000488128 FHP07954 510 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 HLA-DPA1P20036 260 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 GNPDA1P46926 289 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 NRIP1P48552 1158 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 GALK2Q01415 458 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 SMARCB1Q12824 385 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 KEAP1Q14145 624 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 SF1Q15637 639 aaKnown RBP13.79□□□□□ -0.2
COL16A1-214ENST00000488128 PROX2Q3B8N5 592 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
COL16A1-214ENST00000488128 TRAF7Q6Q0C0 670 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 SPATA2LQ8IUW3 424 aaPredicted RBP13.79□□□□□ -0.2
COL16A1-214ENST00000488128 TRPV1Q8NER1 839 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 ULK4Q96C45 1275 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 ST6GAL2Q96JF0 529 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 PPP3R2Q96LZ3 170 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 OR5M11Q96RB7 305 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 NUFIP1Q9UHK0 495 aaKnown RBP13.79□□□□□ -0.2
COL16A1-214ENST00000488128 TBC1D24Q9ULP9 559 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 FABP3P05413 133 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 S100A3P33764 101 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 THPOP40225 353 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 TUBA1BP68363 451 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 ZNF45Q02386 682 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 FADDQ13158 208 aa13.79□□□□□ -0.2
COL16A1-214ENST00000488128 DOC2BQ14184 412 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms