RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 HEBP1Q9NRV9 189 aa13.93□□□□□ -0.18
COL9A2-207ENST00000482722 THSD7BQ9C0I4 1608 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 LOC100506127A0A0U1RQW1 187 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 GOLGA8CPA6NN73 597 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 FFAR3O14843 346 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 ANKRD28O15084 1053 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 GPR42O15529 346 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 DIRAS1O95057 198 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SCELO95171 688 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 HLA-DPA1P20036 260 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 MSH3P20585 1137 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 CTSKP43235 329 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 PPP3CCP48454 512 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 P2RX3P56373 397 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 KEAP1Q14145 624 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SGO1Q5FBB7 561 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SHQ1Q6PI26 577 aaKnown RBP13.92□□□□□ -0.18
COL9A2-207ENST00000482722 LYPD8Q6UX82 237 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 C11orf74Q86VG3 221 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 TEX26Q8N6G2 289 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SIMC1Q8NDZ2 872 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 NETO1Q8TDF5 533 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 IRF2BPLQ9H1B7 796 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 PCDHGC4Q9Y5F7 938 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 NLRC5Q86WI3 1866 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 LOC105371267A0A1B0GV96 52 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 LCHNA4D1U4 455 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 E2F3O00716 465 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 CREG1O75629 220 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 RECQL5O94762 991 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SEMA3DO95025 777 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SLC2A4P14672 509 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 TYMPP19971 482 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 RPL38P63173 70 aaKnown RBP13.92□□□□□ -0.18
COL9A2-207ENST00000482722 DSC1Q08554 894 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 ABRAXAS2Q15018 415 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 WDR45BQ5MNZ6 344 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 NEK5Q6P3R8 708 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 CCDC71Q8IV32 467 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-207ENST00000482722 MSRB3Q8IXL7 192 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 KRTCAP2Q8N6L1 136 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 LPCAT1Q8NF37 534 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 BCL7CQ8WUZ0 217 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-207ENST00000482722 NEDD4LQ96PU5 975 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SDHCQ99643 169 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-207ENST00000482722 APOL4Q9BPW4 351 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 TRIM39Q9HCM9 518 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 TM9SF3Q9HD45 589 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SLC6A13Q9NSD5 602 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 SLC25A37Q9NYZ2 338 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 CRNNQ9UBG3 495 aaPredicted RBP13.92□□□□□ -0.18
COL9A2-207ENST00000482722 PCDHB5Q9Y5E4 795 aa13.92□□□□□ -0.18
COL9A2-207ENST00000482722 PTPRDP23468 1912 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 WBP4O75554 376 aaKnown RBP13.91□□□□□ -0.18
COL9A2-207ENST00000482722 MLYCDO95822 493 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 GTF2H3Q13889 308 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 Q5BKY6 102 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 NADSYN1Q6IA69 706 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 NRARPQ7Z6K4 114 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 GPSM1Q86YR5 675 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 TTC29Q8NA56 475 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-207ENST00000482722 SLC13A3Q8WWT9 602 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 LINGO1Q96FE5 620 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 EGLN2Q96KS0 407 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 SIGLEC11Q96RL6 698 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 ERVK13-1Q9NX77 482 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 HSPE1-MOB4S4R3N1 261 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 DOCK4Q8N1I0 1966 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 A0A096LPI6 279 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 ERVH48-1M5A8F1 160 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 PRAMEF11O60813 436 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 B3GALT4O96024 378 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 C21orf33P30042 268 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-207ENST00000482722 SLC11A1P49279 550 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 HMGCS1Q01581 520 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 LRRC26Q2I0M4 334 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 PARP15Q460N3 678 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 ZRANB3Q5FWF4 1079 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 SPANXN4Q5MJ08 99 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 PSAPL1Q6NUJ1 521 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 GPR149Q86SP6 731 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 GALNT10Q86SR1 603 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 GTF2H4Q92759 462 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 Q96MT0 163 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 UROC1Q96N76 676 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 CINPQ9BW66 212 aaPredicted RBP13.91□□□□□ -0.18
COL9A2-207ENST00000482722 CLPBQ9H078 707 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 PCDHB7Q9Y5E2 793 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 A3GALT2U3KPV4 340 aa13.91□□□□□ -0.18
COL9A2-207ENST00000482722 MYO1GB0I1T2 1018 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 H3BQ06 376 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 RPS24P62847 133 aaKnown RBP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 KIAA0040Q15053 153 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 NFE2Q16621 373 aaPredicted RBP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 MAPKAPK3Q16644 382 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 FAM26DQ5JW98 314 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
COL9A2-207ENST00000482722 PIANPQ8IYJ0 282 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 CADM2Q8N3J6 435 aa13.9□□□□□ -0.18
COL9A2-207ENST00000482722 TCAIMQ8N3R3 496 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms