RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 XKR3Q5GH77 459 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 SLC25A53Q5H9E4 307 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 SLC35D3Q5M8T2 416 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 LCN1P1Q5VSP4 162 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 BSPRYQ5W0U4 402 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 CST9LP1Q5W188 147 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 PRR27Q6MZM9 219 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 TRIM65Q6PJ69 517 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 HOGA1Q86XE5 327 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 THAP8Q8NA92 274 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 GPRC5AQ8NFJ5 357 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 MRPS27Q92552 414 aaKnown RBP3.43□□□□□ -1.86
BRCA2-202ENST00000470094 ZNF689Q96CS4 500 aaPredicted RBP3.43□□□□□ -1.86
BRCA2-202ENST00000470094 FER1L6-AS2Q96M78 137 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 FAM20AQ96MK3 541 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 TRIM15Q9C019 465 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 FAM49AQ9H0Q0 323 aaPredicted RBP3.43□□□□□ -1.86
BRCA2-202ENST00000470094 ST6GALNAC4Q9H4F1 302 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 TRPV4Q9HBA0 871 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 MYNNQ9NPC7 610 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 CPSF3Q9UKF6 684 aaKnown RBP3.43□□□□□ -1.86
BRCA2-202ENST00000470094 TMED3Q9Y3Q3 217 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 CACNA1FO60840 1977 aa3.43□□□□□ -1.86
BRCA2-202ENST00000470094 EDDM13A0A1B0GTR0 161 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 A0A1W2PPQ1 181 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 PI4K2BG5E9Z4 385 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 H7C423 109 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 ZNF195O14628 629 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 EPHB6O15197 1021 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 DCXO43602 365 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 GLRA3O75311 464 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 RECQL5O94762 991 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 NXPH2O95156 264 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 HSP90AB1P08238 724 aaKnown RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 PTAFRP25105 342 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 PCGF2P35227 344 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 GP5P40197 560 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 TNNT3P45378 269 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 CCR10P46092 362 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 CSE1LP55060 971 aaKnown RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 GSDMDP57764 484 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 KLC1Q07866 573 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 PTPRCAPQ14761 206 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 PHKG1Q16816 387 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 HLA-BQ31612 363 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 MCMDC2Q4G0Z9 681 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 XKR6Q5GH73 641 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 TRAT1Q6PIZ9 186 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 FIP1L1Q6UN15 594 aaKnown RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 TMEM207Q6UWW9 146 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 G2E3Q7L622 706 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 NUP54Q7Z3B4 507 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 PTAR1Q7Z6K3 402 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 MMD2Q8IY49 270 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 OR8H3Q8N146 312 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 DCLK2Q8N568 766 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 MAPK1IP1LQ8NDC0 245 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 OR10G8Q8NGN5 311 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 KIF18AQ8NI77 898 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 VANGL1Q8TAA9 524 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 TAF15Q92804 592 aaKnown RBP eCLIP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 MOB3AQ96BX8 217 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 MOCOSQ96EN8 888 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 SIPA1Q96FS4 1042 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 VMP1Q96GC9 406 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 RAB3IPQ96QF0 476 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 NAA11Q9BSU3 229 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 SYT11Q9BT88 431 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 SLC25A23Q9BV35 468 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 FGFBP2Q9BYJ0 223 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 SHARPINQ9H0F6 387 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 CNOT10Q9H9A5 744 aaKnown RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 GRPEL1Q9HAV7 217 aa3.42□□□□□ -1.86
BRCA2-202ENST00000470094 ARGLU1Q9NWB6 273 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 C19orf25Q9UFG5 118 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 ZFP37Q9Y6Q3 630 aaPredicted RBP3.42□□□□□ -1.86
BRCA2-202ENST00000470094 MYH15Q9Y2K3 1946 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 A0A0U1RQG5 324 aaPredicted RBP3.41□□□□□ -1.86
BRCA2-202ENST00000470094 A0A1W2PPM1 405 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 TRIM77I1YAP6 450 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 ARPC2O15144 300 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 SLC7A4O43246 635 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 TADA2AO75478 443 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 CDK2AP2O75956 126 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 SLCO2B1O94956 709 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 TGDSO95455 350 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 CLDN1O95832 211 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 FYNP06241 537 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 TRIM49P0CI25 452 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 TRIM49CP0CI26 452 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 DARSP14868 501 aaKnown RBP3.41□□□□□ -1.86
BRCA2-202ENST00000470094 ALDH3A2P51648 485 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 PAX9P55771 341 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 GCNT1Q02742 428 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 RALGDSQ12967 914 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 CUL3Q13618 768 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 TNIP1Q15025 636 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 E2F5Q15329 346 aa3.41□□□□□ -1.86
BRCA2-202ENST00000470094 HYAL4Q2M3T9 481 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms