RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 TMEM47Q9BQJ4 181 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF251Q9BRH9 671 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 WDR83Q9BRX9 315 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TBCDQ9BTW9 1192 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 FGFBP2Q9BYJ0 223 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 MAGIXQ9H6Y5 334 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CATSPERBQ9H7T0 1116 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 MEAF6Q9HAF1 191 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CYP3A43Q9HB55 503 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TCF7L1Q9HCS4 588 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 EMC7Q9NPA0 242 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DCP1AQ9NPI6 582 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CATSPERZQ9NTU4 200 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PLCXD1Q9NUJ7 323 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SETD4Q9NVD3 440 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 HPF1Q9NWY4 346 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ERVK-18Q9QC07 812 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 NUDT5Q9UKK9 219 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CDH9Q9ULB4 789 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 EMCNQ9ULC0 261 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 RIMKLBQ9ULI2 386 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 COPS3Q9UNS2 423 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CNTN6Q9UQ52 1028 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DTX4Q9Y2E6 619 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DERAQ9Y315 318 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PMF1-BGLAPU3KQ54 211 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 KIAA1551Q9HCM1 1747 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SIPA1L1O43166 1804 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PTPRFP10586 1907 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ALS2Q96Q42 1657 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MYH9P35579 1960 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PHLPP1O60346 1717 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 A0A0A6YYJ9 748 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LOC100130705A0A1B0GUX0 176 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 hCG_1807616A0A1W2PRN6 198 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PRAMEF22A3QJZ6 481 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OR2A25A4D2G3 310 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ERI2A8K979 691 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ERVV-1B6SEH8 477 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 G3V2L1 256 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 G3V2T6 193 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 H3BUI4 141 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 TPP1O14773 563 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MYL12BO14950 172 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 OGTO15294 1046 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ADAM12O43184 909 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GRID2O43424 1007 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SIGLEC6O43699 453 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 HUS1O60921 280 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 INMTO95050 263 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CCNDBP1O95273 360 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LGI1O95970 557 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ALDOAP04075 364 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ASGR2P07307 311 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 RBP1P09455 135 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SAGP10523 405 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PEPDP12955 493 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GYS1P13807 737 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 AKR1B1P15121 316 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CTPS1P17812 591 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MYL12AP19105 171 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 POU3F2P20265 443 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 RAB4AP20338 218 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LPOP22079 712 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PSMB9P28065 219 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ELK4P28324 431 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CD6P30203 668 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GRK4P32298 578 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GJC1P36383 396 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SPAM1P38567 509 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ID4P47928 161 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SCNN1GP51170 649 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CLCN7P51798 805 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CLCNKAP51800 687 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SLC7A2P52569 658 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LIMK2P53671 638 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 BCAT1P54687 386 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 AIF1P55008 147 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CDH8P55286 799 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SNX16P57768 344 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ISL1P61371 349 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 RRAS2P62070 204 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 NOMO3P69849 1222 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SLC35A2P78381 396 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF91Q05481 1191 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 MESP2Q0VG99 397 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 DBPQ10586 325 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 CSTF3Q12996 717 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SPP2Q13103 211 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 SLBPQ14493 270 aaKnown RBP eCLIP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 USP10Q14694 798 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 KCNAB1Q14722 419 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 LTB4RQ15722 352 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 HKDC1Q2TB90 917 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 GTDC1Q4AE62 458 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 BCL7AQ4VC05 210 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PAN2Q504Q3 1202 aaKnown RBP4.73□□□□□ -1.65
SF3B1-207ENST00000468925 AGKQ53H12 422 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PRAMEF13Q5VWM6 474 aa4.73□□□□□ -1.65
SF3B1-207ENST00000468925 PM20D1Q6GTS8 502 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms