RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 FRMD1Q8N878 549 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 ECHDC3Q96DC8 303 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 CHFRQ96EP1 664 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 SLC47A1Q96FL8 570 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 MAGED4Q96JG8 741 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 FRG2BQ96QU4 278 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 OSBPL11Q9BXB4 747 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 TRIM15Q9C019 465 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 ING2Q9H160 280 aa11.57□□□□□ -0.56
PTPRN-204ENST00000423636 MRPL40Q9NQ50 206 aaKnown RBP11.57□□□□□ -0.56
PTPRN-204ENST00000423636 FEZF1A0PJY2 475 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 LINC01553A4QN01 128 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 PPM1DO15297 605 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 XPNPEP2O43895 674 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 PCDH8O95206 1070 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ALPPL2P10696 532 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ALDH4A1P30038 563 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 MASP1P48740 699 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 PPP4R4Q6NUP7 873 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 LPCAT2Q7L5N7 544 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 FAM124AQ86V42 546 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 CPXM2Q8N436 756 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 CATSPER1Q8NEC5 780 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 UCN3Q969E3 161 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 C1QTNF3Q9BXJ4 246 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 XKR8Q9H6D3 395 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 POLR1BQ9H9Y6 1135 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 HEBP1Q9NRV9 189 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 RASSF1Q9NS23 344 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 DNAJC11Q9NVH1 559 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ABCG2Q9UNQ0 655 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ELOVL7A1L3X0 281 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 HEPACAM2A8MVW5 462 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 PRSS23O95084 383 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ENO2P09104 434 aaPredicted RBP11.56□□□□□ -0.56
PTPRN-204ENST00000423636 EBLN1P0CF75 366 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ADH5P11766 374 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 POU2F1P14859 743 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ENGP17813 658 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 PON2Q15165 354 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 CYBRD1Q53TN4 286 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 TMEM240Q5SV17 173 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ELMSAN1Q6PJG2 1045 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 BPIFB6Q8NFQ5 453 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 GANCQ8TET4 914 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 SNX19Q92543 992 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ARRDC3Q96B67 414 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 TRAPPC9Q96Q05 1148 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 ABCG4Q9H172 646 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 TOR3AQ9H497 397 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 IL23AQ9NPF7 189 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 FBXO10Q9UK96 956 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 PLEKHM1Q9Y4G2 1056 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 MYO10Q9HD67 2058 aa11.56□□□□□ -0.56
PTPRN-204ENST00000423636 FPGTO14772 594 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 BMP2P12643 396 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 CYP2A7P20853 494 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 VIPR1P32241 457 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 GJA8P48165 433 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 BNIP2Q12982 314 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 MTA1Q13330 715 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 PMS2P3Q13401 168 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 FAM78AQ5JUQ0 283 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 FAM83HQ6ZRV2 1179 aaPredicted RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 TMEM26Q6ZUK4 368 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 GPR180Q86V85 440 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 OR5AR1Q8NGP9 310 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 CNIH3Q8TBE1 160 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ASZ1Q8WWH4 475 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 PDLIM5Q96HC4 596 aaKnown RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SLC2A11Q9BYW1 496 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ARMC1Q9NVT9 282 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 FREM2Q5SZK8 3169 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 AQP12BA6NM10 295 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 H3BM21 787 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 H3BNH8 94 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SNUPNO95149 360 aaKnown RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ALBP02768 609 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 PABPC4LP0CB38 370 aaKnown RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 RPS3P23396 243 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ALDH9A1P49189 494 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 POLR2LP62875 67 aaKnown RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ACSM2AQ08AH3 577 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ZNF77Q15935 545 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 C2orf27AQ580R0 203 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ACSM2BQ68CK6 577 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 PRMT9Q6P2P2 845 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 HACD2Q6Y1H2 254 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ADCK2Q7Z695 626 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 AQP12AQ8IXF9 295 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 FAM217AQ8IXS0 508 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 HUS1BQ8NHY5 278 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 WDR48Q8TAF3 677 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 GLYATL1Q969I3 302 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 ISG20Q96AZ6 181 aaKnown RBP11.55□□□□□ -0.56
PTPRN-204ENST00000423636 KXD1Q9BQD3 176 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 SLC12A9Q9BXP2 914 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 CFHR5Q9BXR6 569 aa11.55□□□□□ -0.56
PTPRN-204ENST00000423636 CRISPLD2Q9H0B8 497 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms