RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ERGIC1Q969X5 290 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CCDC127Q96BQ5 260 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 VMP1Q96GC9 406 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 FNBP1Q96RU3 617 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CHP1Q99653 195 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 GPATCH1Q9BRR8 931 aaKnown RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 FSD1Q9BTV5 496 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 HEMGNQ9BXL5 484 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SHCBP1LQ9BZQ2 653 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PAIP1Q9H074 479 aaKnown RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZMYND12Q9H0C1 365 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLC25A18Q9H1K4 315 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 DIABLOQ9NR28 239 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PAG1Q9NWQ8 432 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TAS2R10Q9NYW0 307 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 C9orf78Q9NZ63 289 aaPredicted RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 CLIC5Q9NZA1 410 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 SMARCAL1Q9NZC9 954 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 LRWD1Q9UFC0 647 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 RSL24D1Q9UHA3 163 aaKnown RBP3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 DNAJC12Q9UKB3 198 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 TRAF3IP3Q9Y228 551 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 IFT52Q9Y366 437 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ANGPTL3Q9Y5C1 460 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 DEPDC5O75140 1603 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 PREX2Q70Z35 1606 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 KAT6BQ8WYB5 2073 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZFYVE16Q7Z3T8 1539 aa3.29□□□□□ -1.88
SDCBPP3-201ENST00000419629 GAKO14976 1311 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ADGRA3Q8IWK6 1321 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 WDR19Q8NEZ3 1342 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ARPC4-TTLL3A0A0A6YYG9 625 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 C15orf38-AP3S2A0A0A6YYH1 394 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 LOC105371267A0A1B0GV96 52 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 LINC00854A0A1B0GVQ3 168 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TMEM202A6NGA9 273 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SNTNA6NMZ2 147 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 BTNL10A8MVZ5 291 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RSPH10B2B2RC85 870 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 NPIPB11E5RHQ5 1161 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 M0QX08 132 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 VILLO15195 856 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 GYG2O15488 501 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SEC14L5O43304 696 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RANBP6O60518 1105 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 MAGEC1O60732 1142 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TBX10O75333 385 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 GMNNO75496 209 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CSDE1O75534 798 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 KRT36O76013 467 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SEC14L2O76054 403 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 UFL1O94874 794 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 KLHL2O95198 593 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 MOCS3O95396 460 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 STAMBPO95630 424 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RSPH10BP0C881 870 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RARGP13631 454 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ANPEPP15144 967 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CTRB1P17538 263 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 GM2AP17900 193 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ITGAXP20702 1163 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 MARCKSP29966 332 aaPredicted RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 HNRNPH3P31942 346 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CDAP32320 146 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 IFNA8P32881 189 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 UBA7P41226 1012 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SLC1A1P43005 524 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 IFNAR2P48551 515 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TUFMP49411 452 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CDK9P50750 372 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RAP1GDS1P52306 607 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 OLR1P78380 273 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TFAP4Q01664 338 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 BNC1Q01954 994 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 FCHO2Q0JRZ9 810 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TRAP1Q12931 704 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 STK4Q13043 487 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 TRAF3Q13114 568 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DPYSQ14117 519 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DHX34Q14147 1143 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 COG2Q14746 738 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 C16orf72Q14CZ0 275 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 PDK3Q15120 406 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RPS6KA1Q15418 735 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SF3B4Q15427 424 aaKnown RBP eCLIP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CTF1Q16619 201 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 KYNUQ16719 465 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 PHKG1Q16816 387 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 ZNF829Q3KNS6 432 aaPredicted RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DNAL1Q4LDG9 190 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 RILPL1Q5EBL4 403 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 INTS11Q5TA45 600 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 GGNBP1Q5YKI7 109 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 CTRB2Q6GPI1 263 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 SPOPLQ6IQ16 392 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 METTL2BQ6P1Q9 378 aaKnown RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 INO80CQ6PI98 192 aaPredicted RBP3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 LCTLQ6UWM7 567 aa3.28□□□□□ -1.88
SDCBPP3-201ENST00000419629 DSTYKQ6XUX3 929 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms