RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ST6GAL1P15907 406 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 CDH3P22223 829 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 CCND1P24385 295 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 CCKBRP32239 447 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 SEPHS1P49903 392 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 INHBCP55103 352 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 PRDX1Q06830 199 aaKnown RBP12.2□□□□□ -0.46
SMN1-202ENST00000380707 TARDBPQ13148 414 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMN1-202ENST00000380707 MPP2Q14168 576 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 ZIC1Q15915 447 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 TTMPQ5BVD1 217 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 AGBL2Q5U5Z8 902 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 PRAMEF13Q5VWM6 474 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 ICE2Q659A1 982 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 THOC6Q86W42 341 aaKnown RBP12.2□□□□□ -0.46
SMN1-202ENST00000380707 TMPRSS12Q86WS5 348 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 KLHDC8AQ8IYD2 350 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 PTGR2Q8N8N7 351 aaPredicted RBP12.2□□□□□ -0.46
SMN1-202ENST00000380707 UBTD2Q8WUN7 234 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 TMEM74Q96NL1 305 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 FAM111AQ96PZ2 611 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 TRAPPC9Q96Q05 1148 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 DEPDC7Q96QD5 511 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 CD244Q9BZW8 370 aa12.2□□□□□ -0.46
SMN1-202ENST00000380707 CNOT10Q9H9A5 744 aaKnown RBP12.2□□□□□ -0.46
SMN1-202ENST00000380707 SSU72Q9NP77 194 aaKnown RBP12.2□□□□□ -0.46
SMN1-202ENST00000380707 ZFHX4Q86UP3 3567 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 PCM1Q15154 2024 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 CCNT2O60583 730 aaKnown RBP12.19□□□□□ -0.46
SMN1-202ENST00000380707 SNRNP200O75643 2136 aaKnown RBP12.19□□□□□ -0.46
SMN1-202ENST00000380707 IPO13O94829 963 aaKnown RBP12.19□□□□□ -0.46
SMN1-202ENST00000380707 WDR47O94967 919 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 ANKRD34CP0C6C1 535 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 JUPP14923 745 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 TAC1P20366 129 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 MAGP20916 626 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 GRIA3P42263 894 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 C16orf72Q14CZ0 275 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 LCTLQ6UWM7 567 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 TMPRSS7Q7RTY8 843 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 CARFQ8N187 725 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 ARMC2Q8NEN0 867 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 KLHL6Q8WZ60 621 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 ATP6V1G3Q96LB4 118 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 PCBD2Q9H0N5 130 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 ZNF768Q9H5H4 540 aaKnown RBP12.19□□□□□ -0.46
SMN1-202ENST00000380707 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 MRPS30Q9NP92 439 aaKnown RBP12.19□□□□□ -0.46
SMN1-202ENST00000380707 CUEDC1Q9NWM3 386 aaPredicted RBP12.19□□□□□ -0.46
SMN1-202ENST00000380707 TMCO1Q9UM00 188 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 KNTC1P50748 2209 aa12.19□□□□□ -0.46
SMN1-202ENST00000380707 STX16-NPEPL1H3BU86 382 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 DYNC1I1O14576 645 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 STX16O14662 325 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 PRPF4O43172 522 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMN1-202ENST00000380707 NRP2O60462 931 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 ZBTB11O95625 1053 aaPredicted RBP12.18□□□□□ -0.46
SMN1-202ENST00000380707 MYL2P10916 166 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 NELFEP18615 380 aaKnown RBP12.18□□□□□ -0.46
SMN1-202ENST00000380707 ATP5F1P24539 256 aaPredicted RBP12.18□□□□□ -0.46
SMN1-202ENST00000380707 EEF1DP29692 281 aaKnown RBP12.18□□□□□ -0.46
SMN1-202ENST00000380707 CMPK1P30085 196 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 NFKB2Q00653 900 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 TRA2AQ13595 282 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMN1-202ENST00000380707 KCNAB1Q14722 419 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 PCBP2Q15366 365 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMN1-202ENST00000380707 FCRL6Q6DN72 434 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 ZYG11AQ6WRX3 759 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 DGLUCYQ7Z3D6 616 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 CACTIN-AS1Q8N1I8 211 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 GALNT15Q8N3T1 639 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 GOLGA6L1Q8N7Z2 621 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 CCDC63Q8NA47 563 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 NEIL2Q969S2 332 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 MOCOSQ96EN8 888 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 SLC41A2Q96JW4 573 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 HAUS8Q9BT25 410 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 DPH7Q9BTV6 452 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 KCNK9Q9NPC2 374 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 ACSS2Q9NR19 701 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 DNAJC11Q9NVH1 559 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 COPG2Q9UBF2 871 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 KLK4Q9Y5K2 254 aa12.18□□□□□ -0.46
SMN1-202ENST00000380707 A0A1W2PNU3 283 aaPredicted RBP12.17□□□□□ -0.46
SMN1-202ENST00000380707 TMX2-CTNND1H3BSU7 103 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 H7BY64 318 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 K7EPI3 171 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 E2F3O00716 465 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 HGSO14964 777 aaPredicted RBP12.17□□□□□ -0.46
SMN1-202ENST00000380707 HYAL3O43820 417 aaPredicted RBP12.17□□□□□ -0.46
SMN1-202ENST00000380707 FKBP9O95302 570 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 CDH1P12830 882 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 CPA3P15088 417 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 EPORP19235 508 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 ETV4P43268 484 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 PRKAA2P54646 552 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 SH3BP2P78314 561 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 HSD11B2P80365 405 aa12.17□□□□□ -0.46
SMN1-202ENST00000380707 ABATP80404 500 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms