RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 OR52B6Q8NGF0 335 aa20.53■□□□□ 0.88
CBWD3-202ENST00000377342 RAB33BQ9H082 229 aa20.53■□□□□ 0.88
CBWD3-202ENST00000377342 PCBD2Q9H0N5 130 aa20.53■□□□□ 0.88
CBWD3-202ENST00000377342 CUEDC1Q9NWM3 386 aaPredicted RBP20.53■□□□□ 0.88
CBWD3-202ENST00000377342 TMEM9Q9P0T7 183 aa20.53■□□□□ 0.88
CBWD3-202ENST00000377342 CFAP54Q96N23 3096 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 MATN2O00339 956 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 UBFD1O14562 309 aaKnown RBP20.52■□□□□ 0.88
CBWD3-202ENST00000377342 TNFSF14O43557 240 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 RPLP0P05388 317 aaKnown RBP20.52■□□□□ 0.88
CBWD3-202ENST00000377342 GP1BAP07359 652 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 CHRNGP07510 517 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 EPB42P16452 691 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 PRDX3P30048 256 aaKnown RBP20.52■□□□□ 0.88
CBWD3-202ENST00000377342 GYS2P54840 703 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 GUCY1A3Q02108 690 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 BST1Q10588 318 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 TRAF3Q13114 568 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 PRKAA1Q13131 559 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 LSMEM2Q8N112 164 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 CKAP2Q8WWK9 683 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 CDC6Q99741 560 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 NUDT22Q9BRQ3 303 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 HAUS8Q9BT25 410 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 C20orf27Q9GZN8 174 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 TOR4AQ9NXH8 423 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 EPHA6Q9UF33 1036 aa20.52■□□□□ 0.88
CBWD3-202ENST00000377342 MDC1Q14676 2089 aaKnown RBP20.52■□□□□ 0.88
CBWD3-202ENST00000377342 CAPN5O15484 640 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 NRP2O60462 931 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 NPHS1O60500 1241 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 H2AFYO75367 372 aaKnown RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 PIK3CGP48736 1102 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 PRDX1Q06830 199 aaKnown RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 SQSTM1Q13501 440 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 RCN2Q14257 317 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 SLC5A12Q1EHB4 618 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 CFAP157Q5JU67 520 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 KIAA1614Q5VZ46 1190 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 IRGCQ6NXR0 463 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 NETO1Q8TDF5 533 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 TRPC4APQ8TEL6 797 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 DYDC1Q8WWB3 177 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 SLC5A11Q8WWX8 675 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 SREK1Q8WXA9 508 aaKnown RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 NCSTNQ92542 709 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 SLC22A18Q96BI1 424 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 AHCYL2Q96HN2 611 aaKnown RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 DRC3Q9H069 523 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 LRRN3Q9H3W5 708 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 NOL11Q9H8H0 719 aaKnown RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 ZNF395Q9H8N7 513 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 IPPKQ9H8X2 491 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 GPRC5BQ9NZH0 403 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 ZNF225Q9UK10 706 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 CNOT1A5YKK6 2376 aaKnown RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 ITM2AO43736 263 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 LYPLA1O75608 230 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 C9P02748 559 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 CDH1P12830 882 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 LCP2Q13094 533 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 SF1Q15637 639 aaKnown RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 CATSPEREQ5SY80 951 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 ARMC6Q6NXE6 501 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 SLCO4C1Q6ZQN7 724 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 USP53Q70EK8 1073 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 TMPRSS11BQ86T26 416 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 DCBLD1Q8N8Z6 715 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 DEFB124Q8NES8 71 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 PPP1R14CQ8TAE6 165 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 RAB3IL1Q8TBN0 382 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 PPP4R1Q8TF05 950 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 ZNF75CPQ92670 426 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 TGM7Q96PF1 710 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 MANSC1Q9H8J5 431 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 TNFRSF12AQ9NP84 129 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 ATXN7L1Q9ULK2 861 aaPredicted RBP20.51■□□□□ 0.87
CBWD3-202ENST00000377342 KLHL20Q9Y2M5 609 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 DYRK1BQ9Y463 629 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 ANGPTL3Q9Y5C1 460 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 KCNE2Q9Y6J6 123 aa20.51■□□□□ 0.87
CBWD3-202ENST00000377342 NTN3O00634 580 aaPredicted RBP20.5■□□□□ 0.87
CBWD3-202ENST00000377342 TM4SF5O14894 197 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 KLF11O14901 512 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 KIF1CO43896 1103 aaKnown RBP20.5■□□□□ 0.87
CBWD3-202ENST00000377342 NEFHP12036 1026 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 HOXB3P14651 431 aaPredicted RBP20.5■□□□□ 0.87
CBWD3-202ENST00000377342 PVRP15151 417 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 GNAZP19086 355 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 CD22P20273 847 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 GRK2P25098 689 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 MDH1P40925 334 aaKnown RBP20.5■□□□□ 0.87
CBWD3-202ENST00000377342 PCDH1Q08174 1060 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 E2F2Q14209 437 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 WDR74Q6RFH5 385 aaPredicted RBP20.5■□□□□ 0.87
CBWD3-202ENST00000377342 GLRX5Q86SX6 157 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 C17orf64Q86WR6 236 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 AGAP11Q8TF27 550 aa20.5■□□□□ 0.87
CBWD3-202ENST00000377342 PRR11Q96HE9 360 aaPredicted RBP20.5■□□□□ 0.87
CBWD3-202ENST00000377342 CNDP1Q96KN2 507 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms