RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 RNF165Q6ZSG1 346 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 NRROSQ86YC3 692 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 OR52E1Q8NGJ3 308 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 SETD7Q8WTS6 366 aaKnown RBP18.79■□□□□ 0.6
CHTOP-204ENST00000368694 SLC5A11Q8WWX8 675 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 SMPDL3AQ92484 453 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 CXorf40BQ96DE9 158 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 HAUS8Q9BT25 410 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 RAB11FIP5Q9BXF6 653 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 GSDMCQ9BYG8 508 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 XKR8Q9H6D3 395 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 TAC3Q9UHF0 121 aa18.79■□□□□ 0.6
CHTOP-204ENST00000368694 TRBV23OR9-2A0A075B6M9 112 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 PSMD12O00232 456 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-204ENST00000368694 F3P13726 295 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 PRDX6P30041 224 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 BLKP51451 505 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 NME5P56597 212 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 AP5B1Q2VPB7 878 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 LCTLQ6UWM7 567 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 SLCO4C1Q6ZQN7 724 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 RINLQ6ZS11 566 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 ARMCX6Q7L4S7 300 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 TRIM46Q7Z4K8 759 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 SNX32Q86XE0 403 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 DCP2Q8IU60 420 aaKnown RBP18.78■□□□□ 0.6
CHTOP-204ENST00000368694 EDAQ92838 391 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 PPP3R2Q96LZ3 170 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 CCDC167Q9P0B6 97 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 PCOLCE2Q9UKZ9 415 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 ARHGEF17Q96PE2 2063 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-204ENST00000368694 CFAP73A6NFT4 308 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 GYG2O15488 501 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 KDM1AO60341 852 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 WNT1P04628 370 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 THRAP10827 490 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 IDO1P14902 403 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 CD1EP15812 388 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 ATP4BP51164 291 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 DIO3P55073 304 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 DDX39BQ13838 428 aaKnown RBP18.78■□□□□ 0.6
CHTOP-204ENST00000368694 CYLC2Q14093 348 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-204ENST00000368694 GSTA3Q16772 222 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 AGKQ53H12 422 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 GPBAR1Q8TDU6 330 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 TM9SF3Q9HD45 589 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 APOBEC3BQ9UH17 382 aaKnown RBP18.78■□□□□ 0.6
CHTOP-204ENST00000368694 CCL27Q9Y4X3 112 aa18.78■□□□□ 0.6
CHTOP-204ENST00000368694 CACNA1IQ9P0X4 2223 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 PSMB5P28074 263 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 NDUFS1P28331 727 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 RPL38P63173 70 aaKnown RBP18.77■□□□□ 0.6
CHTOP-204ENST00000368694 KCNJ2P63252 427 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 PCDH1Q08174 1060 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 MAMSTRQ6ZN01 415 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 TAF8Q7Z7C8 310 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 C17orf64Q86WR6 236 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 MIER2Q8N344 545 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 LINC01555Q8NAE3 123 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 BTBD10Q9BSF8 475 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 ACPTQ9BZG2 426 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 PCDHGA11Q9Y5H2 935 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 THADAQ6YHU6 1953 aa18.77■□□□□ 0.6
CHTOP-204ENST00000368694 A0A1W2PR77 199 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 CELA2BP08218 269 aaPredicted RBP18.77■□□□□ 0.59
CHTOP-204ENST00000368694 C1GALT1C1LP0DN25 315 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 PCNAP12004 261 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 CDH1P12830 882 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 SLC2A4P14672 509 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 JUNDP17535 347 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 PKLRP30613 574 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 CASP2P42575 452 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 PRRT3Q5FWE3 981 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 ATG9BQ674R7 924 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 PAOXQ6QHF9 649 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 GK5Q6ZS86 529 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 IQCHQ86VS3 1027 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 OR9I1Q8NGQ6 314 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 RP9Q8TA86 221 aaKnown RBP18.77■□□□□ 0.59
CHTOP-204ENST00000368694 MTERF1Q99551 399 aaKnown RBP18.77■□□□□ 0.59
CHTOP-204ENST00000368694 PCBD2Q9H0N5 130 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 TAS2R1Q9NYW7 299 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 TAAR2Q9P1P5 351 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 ZNF624Q9P2J8 865 aaPredicted RBP18.77■□□□□ 0.59
CHTOP-204ENST00000368694 ICKQ9UPZ9 632 aa18.77■□□□□ 0.59
CHTOP-204ENST00000368694 A6NCN8 305 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 H0YIV9 168 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 TLR4O00206 839 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 SEC22BO75396 215 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 FNTBP49356 437 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 MEF2AQ02078 507 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-204ENST00000368694 C1orf61Q13536 156 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 RIPK1Q13546 671 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 CUL3Q13618 768 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 SLBPQ14493 270 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHTOP-204ENST00000368694 RFTN2Q52LD8 501 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-204ENST00000368694 PAGE2BQ5JRK9 111 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 MED27Q6P2C8 311 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 NXPE4Q6UWF7 544 aa18.76■□□□□ 0.59
CHTOP-204ENST00000368694 TRIM48Q8IWZ4 208 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms