RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 DTWD1Q8N5C7 304 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 ZNF548Q8NEK5 533 aaPredicted RBP13.6□□□□□ -0.23
USF1-202ENST00000368020 OR56A3Q8NH54 315 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 RAB7BQ96AH8 199 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 NUS1Q96E22 293 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 ZNF583Q96ND8 569 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 CHID1Q9BWS9 393 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 MAGIXQ9H6Y5 334 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 STOX2Q9P2F5 926 aaPredicted RBP13.6□□□□□ -0.23
USF1-202ENST00000368020 VPS29Q9UBQ0 182 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 OAZ3Q9UMX2 235 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 LRRK1Q38SD2 2015 aa13.6□□□□□ -0.23
USF1-202ENST00000368020 TRBV5-3A0A0A0MS03 114 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 ANHXE9PGG2 379 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 H3BM21 787 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 CLOCKO15516 846 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 MAP3K13O43283 966 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 DFNA5O60443 496 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 NCK1P16333 377 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 CKMT2P17540 419 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 SDC1P18827 310 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 MYF6P23409 242 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 ITPKAP23677 461 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 TUBA4AP68366 448 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 APOFQ13790 326 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 SMAD2Q15796 467 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 XKR6Q5GH73 641 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 TMEM220Q6QAJ8 160 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 NELL1Q92832 810 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 NXPE3Q969Y0 559 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 PYCR2Q96C36 320 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 SDCCAG3Q96C92 435 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 MTFMTQ96DP5 389 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 RMND5BQ96G75 393 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 LINC00615Q96LM1 132 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 RNF145Q96MT1 663 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 RDH12Q96NR8 316 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 HHIPQ96QV1 700 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 PRPF18Q99633 342 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 ADI1Q9BV57 179 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 PHF7Q9BWX1 381 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 ITM2CQ9NQX7 267 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 SMPD3Q9NY59 655 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 TUBA8Q9NY65 449 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 KCNE2Q9Y6J6 123 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 ARHGAP10A1A4S6 786 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 C1QTNF3-AMACRE9PGA6 284 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 AREL1O15033 823 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 VEGFDO43915 354 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 TPST1O60507 370 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 RECQL5O94762 991 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 PRSS23O95084 383 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 KIR3DL1P43629 444 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 YBX1P67809 324 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 ABHD18Q0P651 414 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 MERTKQ12866 999 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 EPS8Q12929 822 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 MTAPQ13126 283 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 E2F2Q14209 437 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 ZXDCQ2QGD7 858 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 KCTD21Q4G0X4 260 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 SPIN4Q56A73 249 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 FOXB2Q5VYV0 432 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 NOXRED1Q6NXP6 359 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 VITQ6UXI7 678 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 EPHX4Q8IUS5 362 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 RIMKLAQ8IXN7 391 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 MICU2Q8IYU8 434 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 ALDH16A1Q8IZ83 802 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 KRTCAP2Q8N6L1 136 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 PHC3Q8NDX5 983 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 WDR20Q8TBZ3 569 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 DGCR14Q96DF8 476 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 TRIM8Q9BZR9 551 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 ATG10Q9H0Y0 220 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 DPEP2Q9H4A9 486 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 KAT8Q9H7Z6 458 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 CLK4Q9HAZ1 481 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 OLAHQ9NV23 265 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 SPATA6Q9NWH7 488 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 FAM120CQ9NX05 1096 aaKnown RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 MBD1Q9UIS9 605 aaPredicted RBP13.59□□□□□ -0.23
USF1-202ENST00000368020 GPR34Q9UPC5 381 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 DLGAP4Q9Y2H0 992 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 NEUROG3Q9Y4Z2 214 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
USF1-202ENST00000368020 EVPLLA8MZ36 301 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 H0YAE9 185 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 HPRP00739 348 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 ADRB3P13945 408 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 RPS9P46781 194 aaKnown RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 CTSCP53634 463 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 ACSM2AQ08AH3 577 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 HTR4Q13639 388 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 TMEM52BQ4KMG9 183 aa13.58□□□□□ -0.24
USF1-202ENST00000368020 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.58□□□□□ -0.24
USF1-202ENST00000368020 PAGE2BQ5JRK9 111 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms