RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 BADQ92934 168 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 OR4K3Q96R72 315 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 UNC80Q8N2C7 3258 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 FAM220BPB1ANY3 271 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 ATG13O75143 517 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 ADH5P11766 374 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 HLA-EP13747 358 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 KIR3DL1P43629 444 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 MAP7Q14244 749 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 LDLRAP1Q5SW96 308 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 ANKRD34AQ69YU3 496 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 DOK6Q6PKX4 331 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 GPR149Q86SP6 731 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 SYT12Q8IV01 421 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 HOMEZQ8IX15 550 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 NXPE3Q969Y0 559 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 OTUB2Q96DC9 234 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 RSPRY1Q96DX4 576 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 OSBPL6Q9BZF3 934 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 REXO4Q9GZR2 422 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 SMURF2Q9HAU4 748 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 PRM3Q9NNZ6 103 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 DCAF13Q9NV06 445 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 NFKBIL1Q9UBC1 381 aaPredicted RBP14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 DKK3Q9UBP4 350 aa14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 MRPS23Q9Y3D9 190 aaKnown RBP14.41□□□□□ -0.1
CLCNKA-201ENST00000331433 VIPR2P41587 438 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 PRLHRP49683 370 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 LIPJQ5W064 366 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 ANKRD26P1Q6NSI1 321 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 ERAP2Q6P179 960 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 RBM23Q86U06 439 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 ZDHHC13Q8IUH4 622 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 VN1R2Q8NFZ6 395 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 WDR20Q8TBZ3 569 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 CSGALNACT1Q8TDX6 532 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 ERLEC1Q96DZ1 483 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 ZFYVE19Q96K21 471 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 MUS81Q96NY9 551 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 VPS35Q96QK1 796 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 HHIPQ96QV1 700 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 PKP4Q99569 1192 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 CCM2Q9BSQ5 444 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 LIN28AQ9H9Z2 209 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 LTB4R2Q9NPC1 389 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 VPS29Q9UBQ0 182 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 DNAJB9Q9UBS3 223 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 RSL24D1Q9UHA3 163 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 FBXO10Q9UK96 956 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 TCF20Q9UGU0 1960 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 SLC5A10A0PJK1 596 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 NPIPB8E9PQR5 432 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 G3V2T6 193 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 K7ESM1 405 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 PLK4O00444 970 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 GNGT2O14610 69 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 WNT9AO14904 365 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 NOBOXO60393 691 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 EFNA1P20827 205 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 IMPA1P29218 277 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 KCNC3Q14003 757 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 UGT8Q16880 541 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 LPCAT2Q7L5N7 544 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 CHST15Q7LFX5 561 aaPredicted RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 FAM9CQ8IZT9 166 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 LMNTD1Q8N9Z9 388 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 DNAJB8Q8NHS0 232 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 GLMNQ92990 594 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 RAD18Q9NS91 495 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 THG1LQ9NWX6 298 aaKnown RBP14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 ERVK-11Q9UQG0 969 aa14.4□□□□□ -0.1
CLCNKA-201ENST00000331433 TRIM64A6NGJ6 449 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 PRRT4C9JH25 899 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SLC9A3R1O14745 358 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SPINT1O43278 529 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 ETHE1O95571 254 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 CATP04040 527 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 RETP07949 1114 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 THRBP10828 461 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 PRPS1L1P21108 318 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 HOXA9P31269 272 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 DYNC1I2Q13409 638 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 LEMD2Q8NC56 503 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF707Q96C28 371 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 CCDC138Q96M89 665 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SH3GL3Q99963 347 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 GULP1Q9UBP9 304 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 AP3M1Q9Y2T2 418 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 LRRK1Q38SD2 2015 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SERTM1A2A2V5 107 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 TRIM64CA6NLI5 447 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 QSOX1O00391 747 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 NPC1O15118 1278 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 UGDHO60701 494 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 ELK4P28324 431 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SHMT2P34897 504 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 ST8SIA6P61647 398 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 CSTF3Q12996 717 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 TMEM240Q5SV17 173 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms