RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 AQP5P55064 265 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 IRF8Q02556 426 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 CHIT1Q13231 466 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 TBCCQ15814 346 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 XKR6Q5GH73 641 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 PRAMEF9Q5VWM5 478 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 LIPJQ5W064 366 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 ADGRF3Q8IZF5 1079 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 PRSS33Q8NF86 280 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 DUSP23Q9BVJ7 150 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 TMEM120AQ9BXJ8 343 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 FIS1Q9Y3D6 152 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 CABIN1Q9Y6J0 2220 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 A0A0G2JND7 137 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 TRPC5OSA6NMA1 111 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 BTN3A3O00478 584 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 KHNYNO15037 678 aaKnown RBP9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 WFS1O76024 890 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 CHEK2O96017 543 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 CAPN1P07384 714 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 JUPP14923 745 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 PSMB5P28074 263 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 HMOX2P30519 316 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 INHBCP55103 352 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 TCF15Q12870 199 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 SF3A3Q12874 501 aaKnown RBP eCLIP9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 DOC2AQ14183 400 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 KIR2DS3Q14952 304 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 PDCD2Q16342 344 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 FAM219BQ5XKK7 198 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ICE2Q659A1 982 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ATG9BQ674R7 924 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 GRHL2Q6ISB3 625 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ZCCHC8Q6NZY4 707 aaKnown RBP9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 EPGNQ6UW88 154 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 NXPE4Q6UWF7 544 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 TMPRSS11BQ86T26 416 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 OR2A1Q8NGT9 310 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 OR4C6Q8NH72 309 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 METTL6Q8TCB7 284 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 TWIST2Q8WVJ9 160 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC22A18Q96BI1 424 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 PTCD3Q96EY7 689 aaKnown RBP9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ACAT2Q9BWD1 397 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 PELI2Q9HAT8 420 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 SPHK1Q9NYA1 384 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 GMEB2Q9UKD1 530 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 DNAJC15Q9Y5T4 150 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 PCM1Q15154 2024 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 OR6C74A6NCV1 312 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 PPM1DO15297 605 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 SKAP2O75563 359 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 RETP07949 1114 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 CDH1P12830 882 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ENGP17813 658 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 CD22P20273 847 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 HNF4AP41235 474 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ARFIP2P53365 341 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ABATP80404 500 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 BTKQ06187 659 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 CCDC6Q16204 474 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 RNF165Q6ZSG1 346 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 GATAD2AQ86YP4 633 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 MYLK4Q86YV6 388 aaPredicted RBP9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC35F3Q8IY50 421 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 SEC16BQ96JE7 1060 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 EFCAB11Q9BUY7 163 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 NUF2Q9BZD4 464 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 SMOC1Q9H4F8 434 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 MEAF6Q9HAF1 191 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ARL2BPQ9Y2Y0 163 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 TIMM22Q9Y584 194 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 ENTPD2Q9Y5L3 495 aa9.88□□□□□ -0.83
VIPAS39-201ENST00000327028 GPR179Q6PRD1 2367 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 PIPSLA2A3N6 862 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 PCDHGA12O60330 932 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 JUNP05412 331 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 C1GALT1C1LP0DN25 315 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 SERPINB3P29508 390 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 IDH3AP50213 366 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 BIRC2Q13490 618 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 CATSPEREQ5SY80 951 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF438Q7Z4V0 828 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF761Q86XN6 746 aaPredicted RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 CACNA2D3Q8IZS8 1091 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 SUMF1Q8NBK3 374 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 CCDC197Q8NCU1 140 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ABHD11Q8NFV4 315 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 OR2I1PQ8NGU4 316 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 FLVCR1-AS1Q8TAF5 88 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 C19orf60Q96EN9 201 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 CCT7Q99832 543 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 GTPBP2Q9BX10 602 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 TBC1D10AQ9BXI6 508 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 APOBEC2Q9Y235 224 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 C2orf74A8MZ97 194 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 ISM1B1AKI9 464 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 MANBAO00462 879 aa9.87□□□□□ -0.83
VIPAS39-201ENST00000327028 FFAR3O14843 346 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms