RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 KCNAB2Q13303 367 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 SIM2Q14190 667 aaPredicted RBP11.2□□□□□ -0.62
PTPN2-201ENST00000309660 HKDC1Q2TB90 917 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 CCNYL2Q5T2Q4 361 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 TMEM179BQ7Z7N9 219 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 TCAIMQ8N3R3 496 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 RASGEF1AQ8N9B8 481 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 BPIFB6Q8NFQ5 453 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 SH3KBP1Q96B97 665 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 CMTM7Q96FZ5 175 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 LMLNQ96KR4 655 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 MYOCQ99972 504 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 NPLQ9BXD5 320 aaPredicted RBP11.2□□□□□ -0.62
PTPN2-201ENST00000309660 GORASP2Q9H8Y8 452 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 FANCEQ9HB96 536 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 SERHLQ9NQF3 203 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 VPS29Q9UBQ0 182 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 FAF1Q9UNN5 650 aaPredicted RBP11.2□□□□□ -0.62
PTPN2-201ENST00000309660 MAGEB17A8MXT2 336 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 CLIC1O00299 241 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 NOL3O60936 208 aaKnown RBP11.2□□□□□ -0.62
PTPN2-201ENST00000309660 MITFO75030 526 aaPredicted RBP11.2□□□□□ -0.62
PTPN2-201ENST00000309660 AMD1P17707 334 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 PTPN5P54829 565 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 ST8SIA6P61647 398 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 MEF2AQ02078 507 aaPredicted RBP11.2□□□□□ -0.62
PTPN2-201ENST00000309660 PLEKHS1Q5SXH7 462 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 VTCN1Q7Z7D3 282 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 ADHFE1Q8IWW8 467 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 CFAP206Q8IYR0 622 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 C1orf52Q8N6N3 182 aaKnown RBP11.2□□□□□ -0.62
PTPN2-201ENST00000309660 AASDHPPTQ9NRN7 309 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 IL36AQ9UHA7 158 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 PRKAB1Q9Y478 270 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 PCDHGA8Q9Y5G5 932 aa11.2□□□□□ -0.62
PTPN2-201ENST00000309660 IGLV3-16A0A075B6K0 115 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 CATP04040 527 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 IRS1P35568 1242 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 SLC6A12P48065 614 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ADARB1P78563 741 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 CTBSQ01459 385 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 TMEM115Q12893 351 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 BIRC2Q13490 618 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 C16orf72Q14CZ0 275 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ZBED5Q49AG3 693 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 CRTC3Q6UUV7 619 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 TRMT11Q7Z4G4 463 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 R3HCC1LQ7Z5L2 792 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ZDHHC21Q8IVQ6 265 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 PARP8Q8N3A8 854 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 NELL1Q92832 810 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 CLP1Q92989 425 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 THAP11Q96EK4 314 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 CPPED1Q9BRF8 314 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ACAT2Q9BWD1 397 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 RIBC2Q9H4K1 309 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 TMEM45AQ9NWC5 275 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ORC6Q9Y5N6 252 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 A0A096LPI6 279 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ATG13O75143 517 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 EPN2O95208 641 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 LAMP1P11279 417 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 CDK4P11802 303 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 JUPP14923 745 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 SYN1P17600 705 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 PFKLP17858 780 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 AGXTP21549 392 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 AP1S2P56377 157 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 IL5RAQ01344 420 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 MESP2Q0VG99 397 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ZDHHC20Q5W0Z9 365 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 BORAQ6PGQ7 559 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 THAP5Q7Z6K1 395 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 FOPNLQ96NB1 174 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 CEP44Q9C0F1 390 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 DCAF13Q9NV06 445 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 THG1LQ9NWX6 298 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 MGAT4DA6NG13 374 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 GFYI3L273 518 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 RECQL5O94762 991 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 MYO1DO94832 1006 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ANXA4P09525 319 aaPredicted RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF30P17039 623 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 VIPR2P41587 438 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 FXNQ16595 210 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 GLYATL1Q969I3 302 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 OR2AG1Q9H205 316 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 FAM118AQ9NWS6 357 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 BTBD3Q9Y2F9 522 aa11.19□□□□□ -0.62
PTPN2-201ENST00000309660 MRPS23Q9Y3D9 190 aaKnown RBP11.19□□□□□ -0.62
PTPN2-201ENST00000309660 KCNE1BA0A087WTH5 132 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 H3BM21 787 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 KPNA5O15131 536 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ETHE1O95571 254 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 DCTP40126 519 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 DGKGP49619 791 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 GALK1P51570 392 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 TMED1Q13445 227 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 UGT8Q16880 541 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms