RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLC10A3P09131 477 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 CA5AP35218 305 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 PIGAP37287 484 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 YBEYP58557 167 aaPredicted RBP12.33□□□□□ -0.43
RETREG3-201ENST00000309428 ZNF404Q494X3 552 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 PLPP4Q5VZY2 271 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 SERPINA13PQ6UXR4 307 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 PLEKHG7Q6ZR37 379 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 LARP4Q71RC2 724 aaKnown RBP eCLIP12.33□□□□□ -0.43
RETREG3-201ENST00000309428 NKAPQ8N5F7 415 aaKnown RBP12.33□□□□□ -0.43
RETREG3-201ENST00000309428 NACC2Q96BF6 587 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 C8orf48Q96LL4 319 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 HDHD2Q9H0R4 259 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 CREBZFQ9NS37 354 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 SRRDQ9UH36 339 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 CLEC4AQ9UMR7 237 aa12.33□□□□□ -0.43
RETREG3-201ENST00000309428 ILVBLA1L0T0 632 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 SLC22A1O15245 554 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 EPN2O95208 641 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 HK3P52790 923 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 NTHL1P78549 312 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 ARF5P84085 180 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 SPIBQ01892 262 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 DSC3Q14574 896 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 CEP78Q5JTW2 689 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 DESI1Q6ICB0 168 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 HMGN2P46Q86SG4 172 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 CDH24Q86UP0 819 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 NPAS4Q8IUM7 802 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 CHPT1Q8WUD6 406 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 TMEM125Q96AQ2 219 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 FUBP3Q96I24 572 aaKnown RBP eCLIP12.33□□□□□ -0.44
RETREG3-201ENST00000309428 EGLN2Q96KS0 407 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 ALPK1Q96QP1 1244 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 ZBTB20Q9HC78 741 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-201ENST00000309428 ARMC1Q9NVT9 282 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 CFAP20Q9Y6A4 193 aaKnown RBP12.33□□□□□ -0.44
RETREG3-201ENST00000309428 OTOFQ9HC10 1997 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 PLXNB2O15031 1838 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 FAM234BA2RU67 622 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 CCDC182A6NF36 153 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 FAM25AB3EWG3 89 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 FAM25CB3EWG5 89 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 FAM25GB3EWG6 89 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 ZW10O43264 779 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 TSPAN19P0C672 248 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 EPB42P16452 691 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 CD70P32970 193 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 MAGEA12P43365 314 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 GNPDA1P46926 289 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 ACADVLP49748 655 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 EEFSECP57772 596 aaKnown RBP12.33□□□□□ -0.44
RETREG3-201ENST00000309428 SNRPD2P62316 118 aaKnown RBP12.33□□□□□ -0.44
RETREG3-201ENST00000309428 MEF2AQ02078 507 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-201ENST00000309428 TCTN1Q2MV58 587 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 SPDYE7PQ495Y7 208 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 MANEALQ5VSG8 457 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 TRIQKQ629K1 86 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 SYCE2Q6PIF2 218 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 Q6ZPB1 254 aaPredicted RBP12.33□□□□□ -0.44
RETREG3-201ENST00000309428 GALNT12Q8IXK2 581 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 TMEM199Q8N511 208 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 DTX3Q8N9I9 347 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 NECTIN4Q96NY8 510 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 PPP1R2P1Q96PQ5 205 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 LRTM1Q9HBL6 345 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 CTPS2Q9NRF8 586 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 SLC9A8Q9Y2E8 581 aa12.33□□□□□ -0.44
RETREG3-201ENST00000309428 TULP3O75386 442 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 EOMESO95936 686 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 TCF3P15923 654 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 PREPP48147 710 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 ZNF135P52742 658 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 CDH4P55283 916 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 SYTL3Q4VX76 610 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 SOWAHCQ53LP3 525 aaPredicted RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 RBM48Q5RL73 367 aaKnown RBP12.32□□□□□ -0.44
RETREG3-201ENST00000309428 C1QTNF12Q5T7M4 302 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 LCN8Q6JVE9 175 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 RETSATQ6NUM9 610 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 ADCK2Q7Z695 626 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 VTCN1Q7Z7D3 282 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 KBTBD8Q8NFY9 601 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 UBXN10Q96LJ8 280 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 PPP3R2Q96LZ3 170 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 TMEM245Q9H330 911 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 SPATA2Q9UM82 520 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 PLXNA1Q9UIW2 1896 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 A0A0G2JN53 185 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 GLYATL1P3A0A0U1RQE8 302 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 AP2A2O94973 939 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 APOL3O95236 402 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 IGLV3-25P01717 112 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 BMP4P12644 408 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 FDXRP22570 491 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 CDH12P55289 794 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 DEFB103AP81534 67 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 CTBSQ01459 385 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 RRM2BQ7LG56 351 aa12.32□□□□□ -0.44
RETREG3-201ENST00000309428 GOLGA7Q7Z5G4 137 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms