RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 DGUOKQ16854 277 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ALG1LQ6GMV1 187 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 OR2T5Q6IEZ7 315 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 VRK3Q8IV63 474 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ZBTB2Q8N680 514 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 OR2T29Q8NH02 315 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 MCFD2Q8NI22 146 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 HSH2DQ96JZ2 352 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 REXO4Q9GZR2 422 aaKnown RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 ZFYVE1Q9HBF4 777 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 ACOT13Q9NPJ3 140 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 SCHIP1Q9P0W5 487 aaPredicted RBP13.17□□□□□ -0.3
CTTN-201ENST00000301843 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 VPS9D1Q9Y2B5 631 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 TESMINQ9Y4I5 508 aa13.17□□□□□ -0.3
CTTN-201ENST00000301843 PRAMEF4O60810 478 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 WDR47O94967 919 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 TGM1P22735 817 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 GRK5P34947 590 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 CSKP41240 450 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 RPIAP49247 311 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 PRAMEF9Q5VWM5 478 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 NCEH1Q6PIU2 408 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 TMEM132CQ8N3T6 1108 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 OR6Q1Q8NGQ2 317 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 DYNC2LI1Q8TCX1 351 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 ZNF300Q96RE9 604 aaPredicted RBP13.16□□□□□ -0.3
CTTN-201ENST00000301843 USE1Q9NZ43 259 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 LHX3Q9UBR4 397 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 BTBD3Q9Y2F9 522 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 TTC34A8MYJ7 566 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 EFCAB9A8MZ26 197 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 RGS10O43665 173 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 SSX4O60224 188 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 GBAP04062 536 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 BPIP17213 487 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 OR1D2P34982 312 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 SLC11A1P49279 550 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 ST13P50502 369 aaKnown RBP13.16□□□□□ -0.3
CTTN-201ENST00000301843 GZMMP51124 257 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 CCL23P55773 120 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 FCGRTP55899 365 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 GABARAPL2P60520 117 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
CTTN-201ENST00000301843 TSTA3Q13630 321 aaPredicted RBP13.16□□□□□ -0.3
CTTN-201ENST00000301843 ZNF648Q5T619 568 aaPredicted RBP13.16□□□□□ -0.3
CTTN-201ENST00000301843 ZSWIM9Q86XI8 627 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 NLGN4XQ8N0W4 816 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 POC5Q8NA72 575 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 BCL7CQ8WUZ0 217 aaPredicted RBP13.16□□□□□ -0.3
CTTN-201ENST00000301843 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
CTTN-201ENST00000301843 DCSTAMPQ9H295 470 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 PALMDQ9NP74 551 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 SCN3BQ9NY72 215 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 IL37Q9NZH6 218 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 CLEC4EQ9ULY5 219 aa13.16□□□□□ -0.3
CTTN-201ENST00000301843 TRBV5-3A0A0A0MS03 114 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 PSMD11O00231 422 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 ALDH2P05091 517 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 GADD45AP24522 165 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 PTPN6P29350 595 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 HNF1BP35680 557 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 MRPL19P49406 292 aaKnown RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 CLCN4P51793 760 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 HIPK1Q86Z02 1210 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 BEND7Q8N7W2 519 aaPredicted RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 YIPF6Q96EC8 236 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 MYO19Q96H55 970 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 THG1LQ9NWX6 298 aaKnown RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 OARD1Q9Y530 152 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 MYO7AQ13402 2215 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 TMEM189-UBE2V1I3L0A0 370 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 CLIC1O00299 241 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 SLC28A1O00337 649 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 FPGTO14772 594 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 CLDN11O75508 207 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 WBP4O75554 376 aaKnown RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 CLDN9O95484 217 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 CD40LGP29965 261 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 NRIP1P48552 1158 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 FLT3LGP49771 235 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 RING1Q06587 406 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 SF3B4Q15427 424 aaKnown RBP eCLIP13.15□□□□□ -0.34e-7■■■■■ 29.8
CTTN-201ENST00000301843 HIST2H2ACQ16777 129 aaPredicted RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 SERPINA13PQ6UXR4 307 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 PLEKHG7Q6ZR37 379 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 HOMEZQ8IX15 550 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 SLIRPQ9GZT3 109 aaKnown RBP13.15□□□□□ -0.3
CTTN-201ENST00000301843 DSN1Q9H410 356 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 RIMKLBQ9ULI2 386 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 DYTNA2CJ06 578 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 SLC16A6O15403 523 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
CTTN-201ENST00000301843 CKBP12277 381 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms