RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 GCAP28676 217 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 GP5P40197 560 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 FOXL2P58012 376 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 IL2P60568 153 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 PRDX1Q06830 199 aaKnown RBP13.17□□□□□ -0.3
VEGFA-201ENST00000230480 SF1Q15637 639 aaKnown RBP13.17□□□□□ -0.3
VEGFA-201ENST00000230480 C18orf21Q32NC0 220 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-201ENST00000230480 SOWAHCQ53LP3 525 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-201ENST00000230480 ATP1A1-AS1Q5TC04 95 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 CMC1Q7Z7K0 106 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 PPM1NQ8N819 430 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 CEP112Q8N8E3 955 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 CT55Q8WUE5 264 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 IFT81Q8WYA0 676 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 SMPDL3AQ92484 453 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 ZUFSPQ96AP4 578 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 PTERQ96BW5 349 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 FOPNLQ96NB1 174 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 CPNE1Q99829 537 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 SGPP1Q9BX95 441 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 ATG10Q9H0Y0 220 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 STARD5Q9NSY2 213 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 INTS7Q9NVH2 962 aaKnown RBP13.17□□□□□ -0.3
VEGFA-201ENST00000230480 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 PCDHB11Q9Y5F2 797 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 TARM1B6A8C7 271 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 ZBTB14O43829 449 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 PRAMEF4O60810 478 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 C8GP07360 202 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 RHOXF2BP0C7M4 288 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 SLC35E2BP0CK96 405 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 NPPBP16860 134 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 SAT1P21673 171 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 POU4F1Q01851 419 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 PDAP1Q13442 181 aaKnown RBP13.16□□□□□ -0.3
VEGFA-201ENST00000230480 MANEAQ5SRI9 462 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 TMTC4Q5T4D3 741 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 PRAMEF9Q5VWM5 478 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 ICE2Q659A1 982 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 AGTRAPQ6RW13 159 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 FAM198BQ6UWH4 519 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 CCDC81Q6ZN84 652 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 RNF44Q7L0R7 432 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 GPR155Q7Z3F1 870 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 DSELQ8IZU8 1212 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 ESX1Q8N693 406 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 OR8K5Q8NH50 307 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 OR56A3Q8NH54 315 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 SLC45A3Q96JT2 553 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 GBP5Q96PP8 586 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 OR2A5Q96R48 311 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 RHOXF2Q9BQY4 288 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 PLCD4Q9BRC7 762 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 DPH7Q9BTV6 452 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 RAB11FIP5Q9BXF6 653 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 ACSS3Q9H6R3 686 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 POPDC3Q9HBV1 291 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 SYTL2Q9HCH5 934 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 LNPEPQ9UIQ6 1025 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 CROTQ9UKG9 612 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 PLCL2Q9UPR0 1127 aa13.16□□□□□ -0.3
VEGFA-201ENST00000230480 DOCK10Q96BY6 2186 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 FITM1A5D6W6 292 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 NPEPPSL1A6NEC2 478 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 MEN1O00255 615 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 TAPBPO15533 448 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 ATP8B1O43520 1251 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 FKBP9O95302 570 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 ONECUT2O95948 504 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 CD1DP15813 335 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 ARL4DP49703 201 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 RGS4P49798 205 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 ITGA1P56199 1179 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 RPS18P62269 152 aaKnown RBP13.15□□□□□ -0.3
VEGFA-201ENST00000230480 TBPL1P62380 186 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 SP140Q13342 867 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 NAE1Q13564 534 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 OR4D1Q15615 310 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 TSNQ15631 228 aaKnown RBP13.15□□□□□ -0.3
VEGFA-201ENST00000230480 PRTGQ2VWP7 1150 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 PTCHD3Q3KNS1 767 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 TTC23LQ6PF05 361 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 PLD3Q8IV08 490 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 GSPT2Q8IYD1 628 aaKnown RBP13.15□□□□□ -0.3
VEGFA-201ENST00000230480 MAGEC3Q8TD91 643 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 SLC22A18Q96BI1 424 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 CCDC138Q96M89 665 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 GPR78Q96P69 363 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 DHRS4Q9BTZ2 278 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 FAM129AQ9BZQ8 928 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 SEMA4CQ9C0C4 833 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 SPNS1Q9H2V7 528 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 IGSF5Q9NSI5 407 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 NSMCE4AQ9NXX6 385 aa13.15□□□□□ -0.3
VEGFA-201ENST00000230480 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.15□□□□□ -0.3
VEGFA-201ENST00000230480 PADI1Q9ULC6 663 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms