RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Plin3Q9DBG5 437 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ccdc86Q9JJ89 426 aa10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gys1Q9Z1E4 738 aaKnown RBP10.07□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm5799E9Q2M1 201 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Akain1G3UWD5 69 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gpr25P0C5I1 358 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Spata13Q5DU57 656 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dusp16Q6PCP3 660 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Klhl31Q8BWA5 634 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vps9d1Q8C190 649 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr722Q8VFC8 308 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 L2hgdhQ91YP0 464 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ska1Q9CPV1 254 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ddx28Q9CWT6 540 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 SpastQ9QYY8 614 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sgk2Q9QZS5 367 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Rfc2Q9WUK4 349 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dgat1Q9Z2A7 498 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sh3pxd2bA2AAY5 908 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Faap100A2ACJ2 879 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tmem245B1AZA5 876 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r94E9PZK8 818 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r102L7N279 857 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm17174M0QWQ9 212 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cops4O88544 406 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fabp3P11404 133 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 GaltQ03249 379 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Kctd21Q3URF8 260 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 MyorgQ69ZQ1 716 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Bend6Q6PFX2 281 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Epsti1Q8VDI1 314 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Pex16Q91XC9 336 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Klhl22Q99JN2 634 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 DiabloQ9JIQ3 237 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Insl5Q9WUG6 135 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Nup98Q6PFD9 1816 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 4930455H04RikD3Z622 58 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr620E9PZ66 313 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r115E9Q0E7 857 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Vmn2r93L7N1Z9 857 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 NagluO88325 739 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 JunbP09450 344 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 MaxP28574 160 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Hcrtr1P58307 416 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lman2lP59481 347 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ermp1Q3UVK0 898 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fzd4Q61088 537 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gpalpp1Q69ZC8 346 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 IpmkQ7TT16 396 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ak5Q920P5 562 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Dnase1l2Q9D1G0 278 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 A0A286YDU1 74 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr652B9EHE6 318 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Glyatl3E9Q5L8 290 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 PfklP12382 780 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 AboP38649 332 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 SiaeP70665 541 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 KhsrpQ3U0V1 748 aaKnown RBP10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Acsm3Q3UNX5 580 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Lrch3Q8BVU0 778 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 DrgxQ8BYH0 263 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Nlrp10Q8CCN1 673 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adgrg2Q8CJ12 1009 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tram1l1Q8QZR0 363 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 DdoQ922Z0 341 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 OgfrQ99PG2 633 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Serpinb11Q9CQV3 388 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 NtsQ9D3P9 169 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fbxl12Q9EPX5 326 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Abcb9Q9JJ59 762 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Scn11aQ9R053 1765 aa10.06□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Zfp952B0V2W4 504 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gm3476K7N6V0 257 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Axin1O35625 863 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Chst3O88199 472 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adh5P28474 374 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ptger3P30557 365 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 TshrP47750 764 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Sox2P48432 319 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Tmem165P52875 323 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Adamts1P97857 968 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Gpat2Q14DK4 801 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 PomkQ3TUA9 349 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 PtprnQ60673 979 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Eipr1Q8K0G5 386 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Uxs1Q91XL3 420 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cldn19Q9ET38 224 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Bag6Q9Z1R2 1154 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Upk1bQ9Z2C6 260 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 NesQ6P5H2 1864 aaKnown RBP10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Ighv11-1A0A075B5R6 117 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 9630041A04RikD3Z3U4 205 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr171G5E8J1 314 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 CaskO70589 926 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Psmd3P14685 530 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Cd40lgP27548 260 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Fitm2P59266 262 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 QrfprP83861 433 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 Olfr684Q7TRN8 312 aa10.05□□□□□ -0.8
Ccdc40-201ENSMUST00000035935 DcxrQ91X52 244 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms